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Detailed information on CNT30632102


BLAST search results

BLAST vs Swiss-Prot:
sp|Q2PMQ4|PETD_SOYBN, E-value = 3e-54

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30407229Vigna unguiculataBeta vulgaris52.42101.4687.9347forward
CNT3090242Vigna unguiculataSolanum tuberosum73.8741.8389.16489forward
CNT3085551Vigna unguiculataVigna radiata25.837597.08171forward
CNT30435040Vigna unguiculataAegilops tauschii73.5654.1788.3487forward
CNT30131654Vigna unguiculataLolium perenne35.6580.2786.86236forward
CNT30419844Vigna unguiculataPapaver somniferum74.0282.0889.59490forward
CNT3057915Vigna unguiculataAmborella trichopoda9.6726.5696.8864reverse complement
CNT30557534Vigna unguiculataPanicum hallii24.3226.5286.96161forward

Expression of CNT30632102

Peptides detected in this lncRNA

>peptide 1 (30 aa)
VQKEFSLDIQYKCHDILFQNETNLIILKKT*

>peptide 2 (34 aa)
MDGSRTAKPTLQAIVPRITTGKIYKRSLGHASSP*

>peptide 3 (46 aa)
MVVATGRRNGFWNLLTFSKKGTVNNPVGTETIKRTPNNLLGTVRSI*

Sequence

>CNT30632102
GGTTCAGAAAGAATTCTCCCTAGATATACAATACAAATGTCATGATATTTTATTTCAAAATGAAACCAATCTTATAATTTTAAAAAAGACCTAACGTTAG
GGATTTCTCAATAGGTAATGTTGCTCCAATACCTAACCAAAGGGCAACTACAGTACCAATCAAAAAGATGGTAGTTGCTACTGGGCGGCGAAATGGATTT
TGGAATTTATTAACATTCTCCAAAAAGGGTACTGTTAATAATCCCGTAGGTACCGAAACCATTAAAAGAACGCCCAATAACTTATTGGGCACTGTACGAA
GTATTTGAAATACGGGAAAAAAATACCATTCAGGAGTATTTCCAAAGGAGTTGCAAAAGGATCCGCAGGTTCCCCAATCATGGATGGTTCTAGAACCGCT
AAGCCTACGTTACAGGCAATAGTACCTAGAATTACTACTGGAAAAATATATAAAAGATCGTTAGGCCATGCGAGTTCTCCATAATAATTATGACCCATTC
CCTTAGCCAATTTAACTCTTAATACAGGATCATTCAAGTCAGGTTTTTTTGTTACTCCCATAATCCATTTTTTTGGAGAATTCCCTTCAACTATTTTTGT
ATGTAAAAAAAAAATTCAATTTTTGTTAAGTTGAAGAAAAATATCTAAATACATGTTTTATT