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Detailed information on CNT30632098


BLAST search results

BLAST vs Swiss-Prot:
sp|Q40677|ALFP_ORYSJ, E-value = 5e-26

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30273043Vigna unguiculataChenopodium quinoa21.246.3382.91158forward
CNT30381337Vigna unguiculataManihot esculenta21.6413.2882.61161forward
CNT30708793Vigna unguiculataGlycine max17.3440.8289.15129forward
CNT30683741Vigna unguiculataTriticum urartu13.1722.6384.6998forward
CNT30620107Vigna unguiculataCajanus cajan20.8311.1592.9155forward

Expression of CNT30632098

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MPGTVTRRVRYAWRLASVFSSPIEAKRFPQVAFDSSMAK

>peptide 2 (36 aa)
MDILLIHCSAFLTLLNVVLRLIDSQQKYSLTFTSHP*

>peptide 3 (38 aa)
MQLSESFLKENGPRDVLTNARNCHKKGTVCLAVSFSIL*

>peptide 4 (39 aa)
MLYSDLLILNKSIPLPLPHIHKWKYSSKKRKKNQITSTS*

Sequence

>CNT30632098
TGTCCTAAAACCATTAATTGAAAACATTTGGGCTATTCAGAATCAATACAAATATGTAAAAAGTTGATGCATCTCTCGATAGGAGAATTCACTGCGAGAT
ACAGAGGCACCAACCAACTCTAATCCAAAATCTTAAGACAATGAATTTATGGATATTTTACTTATACATTGTTCGGCTTTCTTAACTTTACTCAATGTTG
TACTCAGACTTATTGATTCTCAACAAAAGTATTCCCTTACCTTTACCTCACATCCATAAATGGAAGTATAGCTCTAAGAAAAGAAAAAAAAATCAAATCA
CCAGTACAAGTTGAGTGGTTTTCTCACCTGAGAAATTGCAGCATAGCGAGCCAGACCCCAGGCTGCTTCCTTAACAGCCAGAGCAGAGGGACCGTTGGGG
ATGCTCACAACAGTACGCCTAATATGTGGAGTTATGAGTTGATATGATGAAAAAATGAGCATGATTTGTGGCACAAGAAAATAAAGAGCATGAAACTATG
AATGATTTTGCTGCCACTGCAAAGGGCTACGAACACTAACCATTTGGCGAAACGGGCACCTTGCTGATAGTATGCAGCTGAGCGAGAGTTTCCTCAAAGA
GAATGGCCCCAGAGATGTATTGACCAATGCCCGGAACTGTCACAAGAAGGGTACGGTATGCCTGGCGGTTAGCTTCAGTATTCTCTAGCCCAATCGAAGC
CAAACGCTTCCCACAAGTAGCATTCGACTCATCCATGGCCAAAA