Detailed information on CNT30631797


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONTPRT004232, E-value = 7e-55

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30195266Vigna unguiculataPisum sativum14.5224.829070forward
CNT3087529Vigna unguiculataVigna radiata101.8794.7989.21491forward
CNT30172408Vigna unguiculataTrifolium pratense69.0962.5982.58333forward
CNT30147135Vigna unguiculataMedicago truncatula65.1579.982.17314forward
CNT30430817Vigna unguiculataPapaver somniferum20.5412.8782.8399forward
CNT30645967Vigna unguiculataCannabis sativa24.935.1982.5120forward
CNT3026596Vigna unguiculataPopulus trichocarpa28.0132.4581.48135forward

Expression of CNT30631797

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MVEIIYNKTFHFNPLEYEMCQICYTFWLSKIVL*

>peptide 2 (57 aa)
MLQSFYSRATTTTCLPTLRPLKRPTNAAGPLSRPSAMSSTYTTFPSLIGGKTNSKNL*

Sequence

>CNT30631797
TCGTGCAGTAATCAATTACTATGACCAAAAAGGGAAGATGACAAGATACAATACAGTATAAAAACTAGGTTCATTGGCCAACAGAAAATAAAAAAATCAG
AACTAAAGTTTAGATGCTACAAAGTTTCTATTCACGAGCCACAACCACAACTTGTTTGCCAACATTGCGACCACTAAAGAGGCCAACCAACGCTGCAGGG
CCACTCTCAAGACCCTCAGCAATGTCTTCCACATACACAACTTTCCCTTCTCTAATCGGAGGCAAAACAAACTCCAAGAACTTGTAATATGAATGGTAGA
AATCATTTACAATAAAACCTTCCATTTTAATCCTCTTGAATATGAGATGTGCCAAATTTGTTACACCTTCTGGTTGAGCAAGATTGTACTGTGAGATCAT
TCCACAAACAGGTATCCGACCATGGAGTCTCATATTTGGGAGTACTGCATCAAGTGTCTTTCCCCCAACATTCTCAAAGTAA