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Detailed information on CNT3063160


BLAST search results

BLAST vs Swiss-Prot:
sp|P08221|CB21_CUCSA, E-value = 7e-116

BLAST vs NONCODE:
NONSTUT001352, E-value = 2e-10

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30440100Selaginella moellendorffiiAegilops tauschii56.3443.1487.73440forward
CNT30362364Selaginella moellendorffiiSorghum bicolor65.4350.288.06511forward
CNT30596886Selaginella moellendorffiiOryza meridionalis64.2849.3185.66502forward
CNT30603531Selaginella moellendorffiiOryza punctata64.2846.0686.25502forward

Expression of CNT3063160

Peptides detected in this lncRNA

>peptide 1 (67 aa)
MRPPSLKIWEPALNHTASPNLMPFLERSSGKTHPSAPSIAQREWITSSSLFLAKVSGSADSPAVSQP*

>peptide 2 (43 aa)
MAWTKKPNMENIASRPFLSSFTLSSANASGSSANPRGSKLPPG*

>peptide 3 (59 aa)
MYKKNSFGIHSVVETHPKEKKNLRTIFFFVVVGVWYHSPNRFDSPLRAHHALERCPGNL*

>peptide 4 (31 aa)
INLYNTANQGIDGSFPPPLPCTKRIHLEFIA*

Sequence

>CNT3063160
AAATCAATCTTTATAATACAGCAAACCAGGGCATAGATGGATCTTTCCCCCCCCCCCTTCCATGTACAAAAAGAATTCATTTGGAATTCATAGCGTAGTA
GAGACACACCCAAAAGAAAAAAAAAACCTTAGAACAATTTTTTTTTTTGTTGTGGTTGGAGTGTGGTATCATTCACCCAATCGATTTGATTCGCCTCTTC
GCGCCCACCATGCCCTGGAGAGATGCCCTGGGAATCTCTAAGACCCGGGGGTGAAGTTGGTGGTCGGACAAGTTCTCGAGGGGGCCCTTACCGGTGACGA
TGGCCTGGACAAAGAAGCCAAACATGGAGAACATCGCCAGCCGTCCATTCTTGAGCTCCTTCACCTTGAGCTCCGCAAACGCCTCGGGATCCTCGGCCAA
TCCAAGGGGGTCGAAGCTGCCACCTGGGTAGATCGGGTCCGTCACCTCGCCCAACGGCCCTCCGGCGATGCGGCCGCCCTCCTTGAAGATCTGGGAGCCG
GCCTTGAACCACACCGCCTCGCCGAATTTGATGCCGTTCTTGGAGAGGAGCTCCGGGAAGACGCATCCCAGCGCGCCCAGCATCGCCCAGCGGGAGTGGA
TCACCTCGAGCTCCCTGTTCTTGGCGAAGGTCTCTGGGTCGGCCGACAGCCCGGCGGTGTCCCAGCCGTAGTCGCCCGGGTACTCGCCGGTGAGGTAGGA
GGGGGACTCGCCGCTGAAGGGGCCGAGGTACTTGACGCGGTCGGGGCCATACCAGGGGCTGCCTCCTCCCACCGAGGAAGC