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Detailed information on CNT30631185


BLAST search results

BLAST vs Swiss-Prot:
sp|P06353|H33_HORVU, E-value = 5e-26

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30698123Vigna unguiculataQuercus lobata7.8424.283.5291forward
CNT30196655Vigna unguiculataPisum sativum8.9723.1181.73104forward
CNT30390922Vigna unguiculataTriticum turgidum6.3825.2687.8474forward
CNT30591253Vigna unguiculataMusa acuminata10.2638.1484.87119forward
CNT30538358Vigna unguiculataBrassica napus6.6426.9288.3177reverse complement
CNT30259840Vigna unguiculataBrassica rapa6.2925.2686.373forward
CNT30418220Vigna unguiculataPapaver somniferum8.1922.0985.2695forward
CNT30329187Vigna unguiculataDioscorea rotundata11.935.5781.88138forward

Expression of CNT30631185

Peptides detected in this lncRNA

>peptide 1 (62 aa)
MLHRIGLSTFSTDTTRQLNIFGHDGNPLGVDCTQIGVLKQTNQIRLSSFLKSKNGVASSLHR*

>peptide 2 (57 aa)
MQLTSKNTSQSDEIEYLGGELLPWCLSTGGLTGGLLGTSHRRREKREKRRLVFRLRKR

>peptide 3 (46 aa)
MKSNTLVASCFLGAFPPVDLRAVCLVRAIGEERKGKREDWSFDYANE

Sequence

>CNT30631185
ACCAAATCAGTAATGTTTTCTAATAGCGAGATTCTATTACTCAAATATCAGTCTTTGGGATGTAGAAATGCTAAGAACTAGTTCATATATTCTATCTTTT
GTACATCACATAAGAAATCTCGGATAAAACTAAAACCCTAAAAGCAAGAAATATATTGCGAAACAAAGAAATACAAATGCTTCATAGAATTGGTCTAAGC
ACGTTCTCCACGGATACGACGCGCCAGTTGAATATCTTTGGGCATGATGGTAACCCTCTTGGCGTGGATTGCACACAAATTGGTGTCCTCAAACAAACCA
ACCAAATACGCCTCAGCAGCTTCCTGAAGAGCAAGAACGGCGTGGCTTCTTCACTCCACCGGTAGTCGGTGCAGATTTCCTTGCAGCCTACAAGAAAATC
ATAAATCAATCATTAAATACCCTTCAAAATCTTAAAATTAGTTAATCGGAAAAACAAATTCTCGAAAACACTTTGTCAGTTGACAAGAATACCCAATTGA
ATCCGAAAAACGTCATCAACAGAAACCTAACATAGGAAAAACCCTAAATTACACTTGAATTTGGAAAACTCCCATTGTTTATCAACAGCAATATGAAATT
CAACTTGAAAAACTTCAAAATCTGAAACCCTAGCGTAGGAAAAACTTGAATTTGAAAAACCCTATGTTTATCAGCAGGAAAATGCAATTGAATTAAAAAA
AAACTTCGGAATCAGAAACCCCAGCATAGGAAACCCGTAAATTGCACATGAATTTGAAAAAACCCTTTGTTTGTCAACAGGGAATATCAATTGGATAAGA
AAAACTTCACAATCAGAAACCCTAGCATAGGAAAACCCTAAATTGCACTTGAATTTGAAAACCCCTTCGTTTGTGAACAGGAATATGCACTTGACTATGA
AAAACGTCAAATTAAAAAGCCCTAGCATAAAGAAACCCTAGATTGCATTTGAATTTCAAAAACTGTCCGCTAAAGAACAAGAATATGCAATTGACTTCGA
AAAATACATCACAATCAGATGAAATCGAATACCTTGGTGGCGAGCTGCTTCCTTGGTGCCTTTCCACCGGTGGACTTACGGGCGGTTTGCTTGGTACGAG
CCATCGGAGAAGAGAGAAAAGGGAAAAGAGAAGATTGGTCTTTCGATTACGCAAACGAAT