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Detailed information on CNT30631099


BLAST search results

BLAST vs Swiss-Prot:
sp|P36181|HSP80_SOLLC, E-value = 4e-65

BLAST vs NONCODE:
NONMEST000006, E-value = 2e-58

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695408Vigna unguiculataOryza sativa24.0337.1685.91149forward
CNT30523621Vigna unguiculataSetaria italica38.7136.7583.33240forward
CNT30526133Vigna unguiculataPhaseolus vulgaris6.452097.540forward
CNT30554909Vigna unguiculataOryza glaberrima31.4550.6585.13195forward
CNT3061941Vigna unguiculataArabidopsis lyrata13.0631.1588.8981forward
CNT30348495Vigna unguiculataEragrostis tef34.6872.1583.72215forward
CNT30366950Vigna unguiculataSorghum bicolor26.9419.5185.03167forward
CNT3022206Vigna unguiculataPopulus trichocarpa31.6136.0381.63196forward
CNT30103468Vigna unguiculataOryza rufipogon31.4537.2884.62195forward

Expression of CNT30631099

Peptides detected in this lncRNA

>peptide 1 (63 aa)
MLTSAPAARASMNSLVQGYLGSPAKTLTIGIPCHGEGPASLGLPNILLVIIVLCGNNNLLCYKI

>peptide 2 (80 aa)
PLMRHLLNFLLFLLFLLLIFIDFLNFALLFLLLFLILIIRNLLLNSLLNPERNWIADEFGMLLYQVLQTTLLKILKLIFL*

Sequence

>CNT30631099
GACCACTCATGAGACACCTCCTTAATTTTCTTCTTTTTCTTCTCTTCCTTCTCCTTATCTTCATCGACTTCCTCAACTTTGCCCTCCTCTTCCTTCTTCT
CTTCCTCATCCTCATCATCAGAAATCTCCTTCTCAATAGTCTTCTCAATCCAGAGAGAAATTGGATAGCTGATGAATTCGGAATGCTTCTTTATCAAGTC
CTTCAAACGACGCTCCTCAAGATACTCAAGCTGATCTTCCTTTAGGTACAAGGTTATCTTGGTTCCCCTGCCAAGACTCTCACCATCGGTATCCCTTGTC
ACGGTGAAGGACCCGCCAGCTTGGGACTCCCAAACATACTGCTCGTCATCGTTGTGCTTTGTGGTAACAATAACCTTCTCTGCTACAAGATAAGCAGAGT
AGAAACCGACACCAAACTGGCCAATCATGCTCACATCAGCACCTGCAGCCAGGGCTTCCATGAACTCCTTGGTACAAGGTTATCTTGGTTCCCCTGCCAA
GACTCTCACCATCGGTATCCCTTGTCACGGTGAAGGACCCGCCAGCTTGGGACTCCCAAACATACTGCTCGTCATCATTGTGCTTTGTGGTAACAATAAC
CTTCTCTGCTACAAGATAAG