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Detailed information on CNT30631057


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONSLYT002404, E-value = 8e-139

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675843Vigna unguiculataSetaria viridis17.5135.3987.92149forward
CNT3019970Vigna unguiculataCitrullus lanatus15.0442.1183.59128forward
CNT30711421Vigna unguiculataGlycine max21.0362.3788.83179forward
CNT3043899Vigna unguiculataPrunus dulcis19.1533.284.05163forward
CNT3094731Vigna unguiculataSolanum tuberosum31.4917.8584.33268forward
CNT30560521Vigna unguiculataActinidia chinensis24.9129.4985.85212forward
CNT30126131Vigna unguiculataCorymbia citriodora15.6323.2583.46133forward
CNT30362636Vigna unguiculataSorghum bicolor22.9120.984.1195forward
CNT30724273Vigna unguiculataLupinus angustifolius28.6742.3688.93244forward

Expression of CNT30631057

Peptides detected in this lncRNA

>peptide 1 (38 aa)
TSSILLPSASASASSRGGMSASASPASSSMLRPSFSIL*

>peptide 2 (92 aa)
MLLSLNACAFMILSMFAVQPYSPVTRQHGESTTRSDTTTFSTLSPNTSFITLQRPSNFSFNSSFFFFSSSLSSSFSPSLVADTNFLPSNSFS*

>peptide 3 (31 aa)
QLPPSCCPPHQHLHLPEVACQHLPHQHPHQC*

>peptide 4 (55 aa)
NFLHLAALRISICIFQRWHVSICLTSILINAETKLQHPVNSVTESVGIIKTETRS*

Sequence

>CNT30631057
CAACTTCCTCCATCTTGCTGCCCTCCGCATCAGCATCTGCATCTTCCAGAGGTGGCATGTCAGCATCTGCCTCACCAGCATCCTCATCAATGCTGAGACC
AAGCTTCAGCATCCTGTGAATTCTGTTACCGAAAGTGTTGGGATCATCAAGACTGAAACCAGAAGTTAGAAGAGCAGTCTCAAAGAGCAAGAGAACAAGA
TCCTTGACAGATTTATCATTCTTGTCGGCATCAGCACGCTTCCTGAGCTCATCCATGATGGGATTCTCAGGGGTTAATCTCCATCGTCTTCTTGCTTGAC
ATGTAACCAGCCATGCTGCTGTCCCTCAATGCCTGCGCCTTCATGATCCTTTCCATGTTCGCGGTCCAACCATATTCACCAGTCACCAGACAGCACGGAG
AATCCACAACACGATCAGACACCACAACCTTCTCCACCTTGTCACCCAACACATCCTTTATCACCTTGCAAAGACCGTCAAATTTCTCCTTCAATTCTTC
CTTCTTCTTCTTCTCGTCTTCACTCTCATCAAGTTTCAGTCCTTCCTTGGTAGCAGACACCAACTTCTTACCCTCGAACTCCTTCAGCTGACCAACTGCG
TATTCATCAATAGCATCAACCATGAAAAGCACCTCATATCCCTTCTTTTTCAGCCTTTCCAAGAACGGGGAATTCTCCACAGCTTTCCTGCTTTCACCAG
TAATGTAGTAGATGTCACTCTGTCCCTCCTTCATCCTGGTAACATAGTCCTTCAGGCTAGTCATCTCATCACCGCTCTTGGTCGAGTGATACCTCAGCAA
TTCAGCTAGCTTTGACTTGTTCTGGGAATCCTCGTGGATACCCAATTTCAG