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Detailed information on CNT30631012


BLAST search results

BLAST vs Swiss-Prot:
sp|P27520|CB215_PEA, E-value = 7e-157

BLAST vs NONCODE:
NONSTUT002514, E-value = 2e-103

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30701193Vigna unguiculataQuercus lobata49.3749.885.33627forward
CNT3070976Vigna unguiculataQuercus suber25.1262.885.89319forward
CNT30378978Vigna unguiculataManihot esculenta50.7156.1583.07644forward
CNT30711475Vigna unguiculataGlycine max32.2828.1292.68410forward
CNT30561790Vigna unguiculataActinidia chinensis40.4774.3880.16514forward
CNT30172025Vigna unguiculataTrifolium pratense45.5950.1789.12579forward
CNT30311404Vigna unguiculataCamelina sativa50.3997.4178.28640forward
CNT3077068Vigna unguiculataBrassica juncea49.4561.8779.78628forward
CNT30264606Vigna unguiculataBrassica rapa40.9460.6879.81520forward
CNT30612591Vigna unguiculataArabis alpina49.3778.5778.95627forward
CNT30605341Vigna unguiculataGossypium raimondii40.2446.8484.74511forward
CNT30648173Vigna unguiculataRosa chinensis50.7937.1380.62645forward
CNT30204126Vigna unguiculataHelianthus annuus27.1767.3881.16345forward
CNT30625449Vigna unguiculataDaucus carota23.1531.9682.99294forward
CNT30480205Vigna unguiculataArabidopsis halleri39.6966.7579.76504forward
CNT30360562Vigna unguiculataLactuca sativa50.7170.6979.35644forward
CNT3035928Vigna unguiculataCucumis melo20.1654.0183.98256forward
CNT30331118Vigna unguiculataDioscorea rotundata14.4131.2884.15183forward
CNT30112551Vigna unguiculataFicus carica37.6477.2282.43478forward
CNT30723501Vigna unguiculataLupinus angustifolius27.7232.5986.93352forward
CNT30114814Vigna unguiculataEutrema salsugineum50.4777.7978.94641forward

Expression of CNT30631012

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MENIAKRPFLSSLTFNSANASGSSARPRGSKAPPG*

>peptide 2 (30 aa)
MLIAGKQWWPWLCCVGKGLFFLWFCECVVEN

>peptide 3 (92 aa)
LHLRRHNKLTCSLSRGKVGGISPSIVGNRVSNMVVKVLNRALASDNGLNKETKHGEHSQATILEFLDLQLRECIRVISKTKRVKGTTRVDRV*

>peptide 4 (46 aa)
MKLEHLPDALRSTLDGAAHAGATFAGAAGLADELIDLLESSLTSEC*

>peptide 5 (37 aa)
MMESAQRMDPSTWDGQGHTCFPQPHPMQNQSVISSNR*

Sequence

>CNT30631012
CATTGCATCTAAGAAGGCACAACAAGTTGACATGCTCATTGTCCAGGGGTAAAGTTGGTGGCATAAGCCCAAGCATTGTTGGCAACAGGGTCAGCAACAT
GGTCGTAAAGGTTCTGAATAGGGCCCTTGCCAGTGACAATGGCCTGAACAAAGAAACCAAACATGGAGAACATAGCCAAGCGACCATTCTTGAGTTCCTT
GACCTTCAACTCCGCGAATGCATCAGGGTCATCAGCAAGACCAAGAGGGTCAAAGGCACCACCAGGGTAGATAGGGTCTAGCCCTTCACCAAGAGGTCCT
CCTCCAACTCTGTAACCTTCAACAAACCCCATAAGCACAACCTGCACAGCCCAGATGGCAAGAATGCTCTGAGCATGGATTAGGTTTGGGTTCCCCAAAT
AGTCAAGTCCTCCCTCAGAGAAGATCTGTGCACCAGCCTTGAACCACACTGCCTCACCGAATTTCACACCGTTCTTCTCAAGAATCTCAGGGAAGGTGCA
TCCCAGAGCACCAAGCATGGCCCATCTGCTGTGAATCACCTCCAACTCACGGTTCCTGGCAAAGGTTTCTGGGTCAGCTGATAATCCAGCTGTGTCCCAT
CCGTAGTCACCGGGGAATTCACCAGTCAGGTATGATGGAATCTGCTCAGAGAATGGACCCAAGTACTTGGGACGGTCAGGGCCATACCTGTTTTCCACAA
CCACACCCCATGCAAAATCAATCAGTCATTTCCTCAAACAGATAGCCAACATAGTGTTTATCTTCACAATGCTTGCATAATCACTGGTTTTCTAGTTAAC
CCTAGTTGTTCAGTACAATACAAAATACAAATCCAGTTCTATAGATTCTCTTGTGCTGTGTTCTTTTATCACAATTAGAGTTTGACATTCAATGCAGACC
CTTATAGGGTAAACTAGTGAGGCAAAACAACACCAAAATCATGAAAGCTTGTAACTTTAGTATTATTATACTAAAACCGATCATAACTAGTAATACCAGA
TACTAACATTTTGTAGTATAACAAGAAGGGTGCATGGATGAATGAAATTGGAGCACTTACCAGATGCTCTGAGGAGCACTCTTGACGGTGCGGCGCATGC
TGGTGCGACCTTTGCCGGAGCCGCCGGTCTTGCGGACGAACTCATTGACCTGCTTGAGAGCAGTTTGACCAGCGAATGCTGATTGCTGGAAAGCAGTGGT
GGCCATGGCTGTGTTGTGTTGGCAAAGGTCTCTTCTTTCTTTGGTTCTGTGAGTGTGTTGTGGAGAATGA