Detailed information on CNT30631005


BLAST search results

BLAST vs Swiss-Prot:
sp|Q01595|CCDP_MAIZE, E-value = 7e-24

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30201624Vigna unguiculataPisum sativum17.2723.5181.58114forward
CNT30711363Vigna unguiculataGlycine max37.4242.3783.81247forward
CNT3085531Vigna unguiculataVigna radiata29.5578.3189.74195forward
CNT30171111Vigna unguiculataTrifolium pratense26.9721.0782.58178forward
CNT30143877Vigna unguiculataMedicago truncatula27.5832.0483.52182forward

Expression of CNT30631005

Peptides detected in this lncRNA

>peptide 1 (54 aa)
KKYNKFCILVIKIWFNKSNPSNIPQKQNLQSSPNIPEKTKYYLLRHTNMSLPNY*

>peptide 2 (71 aa)
MAVQRQSAASRSAKPWSNAQHLLETGEPTTTLTSPRMSAQTPSFRVSLGHFPDGGGGDWGWHVPHAWVEVV*

>peptide 3 (43 aa)
RSTINSAYWSLRSGLTNLTLPTYPKNKTCKVPQIYQKRRNITY*

>peptide 4 (34 aa)
MNLCTEEHTECDRNIQVDSKHIGFDGSAEAKCSL*

Sequence

>CNT30631005
GAAGAAGTACAATAAATTCTGCATATTGGTCATTAAGATCTGGTTTAACAAATCTAACCCTTCCAACATACCCCAAAAACAAAACTTGCAAAGTTCCCCA
AATATACCAGAAAAGACGAAATATTACTTACTAAGACACACAAACATGTCTTTGCCAAATTATTAAAACCACACATTGCAGAAAAAGAAGAACTGTAAAA
ACAAGACAACAGTTTGAGGACACAAGTGACGAGATGAACCTATGCACTGAGGAGCACACTGAGTGTGATAGGAACATTCAGGTTGATTCCAAGCACATTG
GCTTTGATGGCAGTGCAGAGGCAAAGTGCAGCCTCTAGATCAGCCAAACCCTGGAGCAATGCACAACACTTGCTGGAGACAGGTGAGCCAACAACAACGT
TAACAAGTCCTAGGATGTCAGCACAAACCCCTAGCTTTAGGGTGTCCTTAGGGCACTTCCCTGATGGAGGAGGAGGAGATTGGGGATGGCATGTGCCACA
TGCATGGGTTGAAGTGGTGTAGGCAAGGAGAGAGAGCAGCATGATGGTGGCAATAAGCTTGTTGGAAGCCATTGCAGGGTTTGGAATGAGAAACACTTTT
GCAGAGTGTGGTTTGGTTTGAGAGTGAATATCACAGTGGGAAAGAGAAGAGAGGTGGACC