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Detailed information on CNT30630923


BLAST search results

BLAST vs Swiss-Prot:
sp|P36181|HSP80_SOLLC, E-value = 5e-171

BLAST vs NONCODE:
NONSLYT002404, E-value = 8e-131

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30729348Vigna unguiculataCorchorus capsularis42.7967.1880.1608forward
CNT30402735Vigna unguiculataBeta vulgaris34.7636.2781.98494forward
CNT3082269Vigna unguiculataBrassica juncea32.4471.1483.3461forward
CNT30652736Vigna unguiculataRosa chinensis27.7368.0584.01394forward

Expression of CNT30630923

Peptides detected in this lncRNA

>peptide 1 (87 aa)
MHFLTKFLRMTFRILFCCSISLEMLRGRSSESTIPLTKLRYSGINSSQLSMMKTLRTYSLMLLGFFLVSKISKGALFGIKRIALNSN*

>peptide 2 (57 aa)
KVLGSSRLKPEVRRAVSKSKRTRSLTDLSFLSASARFLSSSMMGFSGLISIVFLLDM*

>peptide 3 (31 aa)
MFFPIVGKTLVESSIFFFGNLFRFPHPDGLLF

>peptide 4 (92 aa)
MLLSLNACAFMILSMFAVQPYSPVTRQHGESTTRSDTTTFSTLSPNTSFITLQRPSNFSFNSSFFFFSSSLSSSFSPSLVADTNFLPSNSFS*

Sequence

>CNT30630923
CGAAAGTGTTGGGATCATCAAGACTGAAACCAGAAGTTAGAAGAGCAGTCTCAAAGAGCAAGAGAACAAGATCCTTGACAGATTTATCATTCTTGTCGGC
ATCAGCACGCTTCCTGAGCTCATCCATGATGGGATTCTCAGGGTTAATCTCCATCGTCTTCTTGCTTGACATGTAACCAGCCATGCTGCTGTCCCTCAAT
GCCTGCGCCTTCATGATCCTTTCCATGTTCGCGGTCCAACCATATTCACCAGTCACCAGACAGCACGGAGAATCCACAACACGATCAGACACCACAACCT
TCTCCACCTTGTCACCCAACACATCCTTTATCACCTTGCAAAGACCGTCAAATTTCTCCTTCAATTCTTCCTTCTTCTTCTTCTCGTCTTCACTCTCATC
AAGTTTCAGTCCTTCCTTGGTAGCAGACACCAACTTCTTACCCTCGAACTCCTTCAGCTGACCAACTGCGTATTCATCAATAGCATCAACCATGAAAAGC
ACCTCATATCCCTTCTTTTTCAGCCTTTCCAAGAACGGGGAATTCTCCACAGCTTTCCTGCTTTCACCAGTAATGTAGTAGATGTCACTCTGTCCCTCCT
TCATCCTGGTAACATAGTCCTTCAGGCTAGTCATCTCATCACCGCTCTTGTCCTTCCTTGGTAGCAGACACCAACTTCTTACCCTCGAACTCCTTCAGCT
GACCAACTGCGTATTCATCAATAGCATCAACCATGAAAAGCACCTCATATCCCTTCTTTTTCAGCCTTTCCAAGAACGGGGAATTCTCCACAGCTTTCCT
GCTTTCACCAGTAATGTAGTAGATGTCACTCTGTCCCTCCTTCATCCTGGTAACATAGTCCTTCAGGCTAGTCATCTCATCACCGCTCTTGGTCGAGTGA
TACCTCAGCAATTCAGCTAGCTTTGACTTGTTCTGGGAATCCTCGTGGATACCCAATTTCAGGTTCTTAGAGAAGGCTTCGTAGAACTTGTTATAATCTT
CCTTGTTCTCGGCAATTTCAAAGAAAAGCTCGATGCACTTCTTAACCAAGTTCTTGCGGATGACTTTCAGGATCTTGTTTTGCTGCAGCATTTCTCTGGA
GATGTTAAGAGGAAGGTCCTCAGAATCCACAATACCCTTAACAAAGCTAAGATATTCTGGAATCAACTCTTCGCAGTTGTCCATGATGAAGACTCTGCGT
ACATACAGCTTAATGTTGTTAGGCTTCTTCCTTGTGTCAAAGATATCAAAAGGCGCCCTCTTCGGGATAAAGAGGATAGCCTTAAACTCCAACTGACCCT
CAACAGAGAAGTGCTTAACAGCCAAATGTTCTTCCCAATCGTTGGTAAGACTCTTGTAGAAAGCAGCATATTCTTCTTTGGTAATCTCTTCAGGTTTCCT
CATCCAGATGGGCTTCTGTTT