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Detailed information on CNT30630828


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH33|UBQ11_ARATH, E-value = 6e-111

BLAST vs NONCODE:
NONMEST001181, E-value = 7e-99

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30513340Vigna unguiculataJuglans regia82.0372.8385.56630forward
CNT30635990Vigna unguiculataCapsicum annuum80.8629.9686.47621forward

Expression of CNT30630828

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MVSELSTSRVMVLPVRVLTKICIPPLRRRTR*

>peptide 2 (31 aa)
MVSELSTSRVMVLPVRVLTKICMPPRRRRTK*

Sequence

>CNT30630828
CATAATAAAAAAGGGACAATGCAGTCCAACACAAACCAAATTTATTTAAAGGGTCAATAAAGACCCAATCCACATTACGATTTTGAAAATGTCTTGAAAG
CACTAAAAACAGAGATCAGCACAGTCTAAAAGCCCCCACGAAGACGGAGGACAAGGTGAAGAGTTGACTCCTTCTGAATGTTGTAATCAGCAAGGGTCCT
TCCATCCTCCAACTGCTTCCCTGCAAAGATCAACCTCTGCTGGTCCGGTGGGATGCCCTCCTTGTCCTGAATTTTGGCCTTCACGTTGTCAATGGTGTCA
GAGCTCTCCACCTCAAGGGTAATGGTCTTGCCCGTAAGAGTCTTAACGAAAATCTGCATTCCTCCCCTTAGACGAAGGACAAGGTGAAGGGTAGACTCCT
TCTGAATGTTATAGTCAGCAAGGGGTCCTTCCATCCTCCAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGA
TCTTGGCCTTCACGTTGTCGATGGTGTCAGAGCTCTCAACCTCAAGGGTGATGGTCTTGCCGGTGAGAGTCTTAACAAAGATCTGCATGCCACCGCGGAG
GCGGAGAACTAAGTGAAGGGTTGATTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGTCCATCCTCCAACTGCTTTCCAGCGAAGATGAGACGTTGCTGG
TCTGGGGGAATTCCTTCCTTATCCTGGATCTTGGCCTTCACGTTGTCAATAGTGTCGGAGCTCTCGAC