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Detailed information on CNT30630785


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH33|UBQ11_ARATH, E-value = 2e-159

BLAST vs NONCODE:
NONMEST001181, E-value = 7e-121

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30513318Vigna unguiculataJuglans regia79.666.6386.45679forward
CNT3019912Vigna unguiculataCitrullus lanatus79.640.6386.3679forward
CNT30381863Vigna unguiculataManihot esculenta79.2571.3885.21676forward
CNT30525954Vigna unguiculataPhaseolus vulgaris80.6662.7296.22688forward
CNT30201346Vigna unguiculataPisum sativum78.6665.0287.78671forward
CNT30506305Vigna unguiculataNicotiana attenuata79.7272.1185.59680forward
CNT30710308Vigna unguiculataGlycine max80.6674.4688.37688forward
CNT3044338Vigna unguiculataPrunus dulcis76.9162.386.28656forward
CNT30169912Vigna unguiculataPistacia vera79.642.786.45679forward
CNT30635987Vigna unguiculataCapsicum annuum80.6642.5585.32688forward
CNT3094992Vigna unguiculataSolanum tuberosum80.6659.1186.48688forward
CNT30568721Vigna unguiculataActinidia chinensis78.949.4984.55673forward
CNT3089456Vigna unguiculataVigna radiata98.3656.3895.35839forward
CNT30510145Vigna unguiculataSolanum lycopersicum80.6648.3184.88688forward
CNT30171036Vigna unguiculataTrifolium pratense80.6643.9386.05688forward
CNT30311067Vigna unguiculataCamelina sativa79.653.7685.42679forward
CNT3077671Vigna unguiculataBrassica juncea80.6670.7185.32688forward
CNT30264722Vigna unguiculataBrassica rapa77.1462.1984.95658forward
CNT30217431Vigna unguiculataKalanchoe fedtschenkoi79.650.1586.3679forward
CNT30652979Vigna unguiculataRosa chinensis78.6661.2887.03671forward
CNT30359535Vigna unguiculataLactuca sativa79.640.285.42679forward
CNT30153569Vigna unguiculataPrunus persica79.2574.9485.8676forward
CNT30327242Vigna unguiculataAsparagus officinalis79.668.2485.27679forward
CNT30149632Vigna unguiculataBrachypodium distachyon75.8567.4787.33647forward
CNT30174651Vigna unguiculataVigna angularis98.1260.8792.11837forward
CNT30113839Vigna unguiculataFicus carica76.0857.1385.98649forward
CNT30726539Vigna unguiculataLupinus angustifolius79.671.486.3679forward
CNT3050869Vigna unguiculataCucumis sativus72.9283.7186.01622forward
CNT30114931Vigna unguiculataEutrema salsugineum79.661.2385.27679forward

Expression of CNT30630785

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MVSELSTSRVMVLPVRVLTKICMPPRRRRTR*

>peptide 2 (42 aa)
MRRCWSGGIPSLSWILAFTLSIVSELSTSRVMVFPVRVLTKIC

Sequence

>CNT30630785
TAAGGCAACATAGAATAGCATAGTATATATCTAAAGTTTCATAATAAAAAAGGGACAATGCAGTCCAACACAAACCAAATTTATTTAAAGGGTCAATAAA
GACCCAATCCACATTACGATTTTGAAAATGTCTTGAAAGCACTAAAAACAGAGATCAGCACAGTCTAAAAGCCCCCACGAAGACGGAGGACAAGGTGAAG
GGTAGACTCCTTCTGAATGTTATAGTCAGCAAGGGTCCTCCCATCCTCAAGCTGCTTCCCAGCGAAGATCAACCTCTGCTGGTCCGGGGGAATACCCTCC
TTGTCCTGGATCTTGGCCTTCACATTGTCAATAGTGTCCGAACTCTCCACCTCAAGGGTAATAGTCTTCCCAGTGAGGGTCTTCACAAAGATCTGCATAC
CACCACGAAGACGCAGCACCAAGTGGAGAGTTGACTCCTTCTGGATGTTATAGTCGGCCAGGGTCCTTCCATCCTCCAGCTGCTTTCCGGCGAAGATCAA
CCTCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCAGAGCTCTCAACCTCAAGGGTGATGGTCTTGCCG
GTGAGAGTCTTAACAAAGATCTGCATGCCACCGCGGAGACGGAGAACTAGGTGAAGGGTTGATTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGTCCAT
CCTCCAACTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCTGGGGGAATTCCTTCCTTATCCTGGATCTTGGCCTTCACGTTGTCAATAGTGTCGGAGCT
CTCGACCTCGAGAGTGATGGTCTTTCCGGTAAGGGTCTTAACGAAGATCTGCA