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Detailed information on CNT30630708


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9XF89|CB5_ARATH, E-value = 9e-43

BLAST vs NONCODE:
NONCQUT009402, E-value = 3e-09

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30317005Vigna unguiculataCorylus avellana39.6936.4389.22102forward
CNT30380061Vigna unguiculataManihot esculenta80.5454.9183.09207forward
CNT30503251Vigna unguiculataNicotiana attenuata80.9323.9181.25208forward
CNT30712704Vigna unguiculataGlycine max98.8369.7893.7254forward
CNT30544306Vigna unguiculataBrassica napus77.0456.7381.82198forward
CNT3061832Vigna unguiculataArabidopsis lyrata25.2921.1789.2365forward
CNT3077810Vigna unguiculataBrassica juncea40.4716.6982.69104forward
CNT30216944Vigna unguiculataKalanchoe fedtschenkoi47.8617.4781.3123forward
CNT30479805Vigna unguiculataArabidopsis halleri40.4734.2187.5104forward
CNT30322408Vigna unguiculataAsparagus officinalis64.5919.181.93166forward

Expression of CNT30630708

Peptides detected in this lncRNA

>peptide 1 (46 aa)
EQVVTKRVTKMFCQVLNRAFSSHISLEVETEHRKHSKSTILNFLHL*

Sequence

>CNT30630708
GAGCAAGTTGTTACCAAAAGGGTCACTAAGATGTTTTGCCAAGTTCTCAACCGGGCCTTCTCCAGTCACATAAGCTTGGAAGTAGAAACCGAGCATCGCA
AACATAGCAAGTCTACCATTCTTAATTTCCTTCACCTTTAGAAGTGCAGCTTGGTCTGGATCCTTTGCTAGCCCCAACGGGTCGAATGGACCACCTGGGT
GAAGCTTGAATGATGAATCCAGCAGCACCAAGCATTGCCCATCTCGCATGAATCAAC