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Detailed information on CNT30630598


BLAST search results

BLAST vs Swiss-Prot:
sp|O65819|H2B3_SOLLC, E-value = 2e-59

BLAST vs NONCODE:
NONGMAT000269, E-value = 2e-58

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693619Vigna unguiculataOryza sativa22.4419.7584.8125forward
CNT30671420Vigna unguiculataSetaria viridis20.2939.5185.84113forward
CNT30523142Vigna unguiculataSetaria italica43.9947.1280.82245forward
CNT3072234Vigna unguiculataQuercus suber28.3725.0887.97158forward
CNT30163367Vigna unguiculataPistacia vera46.1430.8581.71257forward
CNT30301816Vigna unguiculataTriticum aestivum47.7638.2781.95266forward
CNT30395424Vigna unguiculataTriticum turgidum46.1453.4382.1257forward
CNT3086649Vigna unguiculataVigna radiata91.7468.592.37511forward
CNT30552027Vigna unguiculataOryza glaberrima47.7649.3580.83266forward
CNT30171046Vigna unguiculataTrifolium pratense46.1472.3986.77257forward
CNT30443203Vigna unguiculataAegilops tauschii47.7640.5581.2266forward
CNT30244799Vigna unguiculataAvena sativa47.7637.0581.95266forward
CNT30660053Vigna unguiculataTriticum dicoccoides47.7640.1283.08266forward
CNT30597299Vigna unguiculataFraxinus excelsior35.9136.4384.5200forward
CNT30457276Vigna unguiculataSaccharum spontaneum46.1424.1181.71257forward
CNT30130711Vigna unguiculataLolium perenne47.7639.1281.95266forward
CNT30231835Vigna unguiculataAnanas comosus22.0818.9286.18123forward
CNT3066775Vigna unguiculataLeersia perrieri20.2929.4387.61113forward
CNT30363575Vigna unguiculataSorghum bicolor46.1427.8780.93257forward
CNT30619778Vigna unguiculataCajanus cajan22.4418.8887.2125forward
CNT30596761Vigna unguiculataOryza meridionalis22.4415.8283.2125forward
CNT30369169Vigna unguiculataOryza glumipatula47.7646.4283.08266forward
CNT30429187Vigna unguiculataPapaver somniferum48.2925.8281.41269forward
CNT30327286Vigna unguiculataAsparagus officinalis51.7131.8683.33288forward
CNT30101075Vigna unguiculataOryza rufipogon22.4417.8384125forward
CNT30576366Vigna unguiculataOryza barthii20.2921.5688.5113forward
CNT30496069Vigna unguiculataDigitaria exilis47.7633.3381.2266forward
CNT30114697Vigna unguiculataEutrema salsugineum50.2745.6882.5280forward

Expression of CNT30630598

Peptides detected in this lncRNA

>peptide 1 (29 aa)
LKCSRKQEMSLQRTIPNIHQENPNSDKRS*

Sequence

>CNT30630598
ATTAAAATGTTCCAGAAAACAAGAAATGTCATTACAAAGAACGATCCCAAATATACATCAAGAAAACCCTAACTCTGACAAAAGATCTTAAGAACTGGTA
AATTTGGTGACGGCCTTGGTGCCTTCAGAGACGGCGTGCTTAGCAAGCTCACCGGGGAGGACAAGACGAACAGCGGTCTGGATTTCACGGGATGTGATGG
TGGGCTTCTTGTTGTAACGAGCCAATCTGGACGATTCTTGAGCAAGCTTCTCAAAGATATCATTGATGAAGCTGTTCATGATCCCCATTGCCTTGCTGGA
GATCCCAATGTCAGGGTGGACCTGTTTGAGAACCTTAAAGATATAGATCTTGTAGGTCTCGACACTCTTTGCTTTTCTCTTCTTCTTCTTGTCTCCGGAG
GTAGCATCCTTCGGAATCTTCTTCTCAGCCTTCGTTTTCTCAGCAGGAGCCTTCTCTGCAGGTTTTTTCTCTGCGGGTTTCTTCTCACCCTTGGCCATGG
ATTTCTCACAGAAGGTTTGATAAGATTGAGTAAGGTGTAAATCAGAGAATGTGAATT