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Detailed information on CNT30630546


BLAST search results

BLAST vs Swiss-Prot:
sp|Q8VZC0|UXS1_ARATH, E-value = 1e-50

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30143812Vigna unguiculataMedicago truncatula22.5112.0582.55149forward
CNT30174824Vigna unguiculataVigna angularis69.7948.6395.67462forward

Expression of CNT30630546

Peptides detected in this lncRNA

>peptide 1 (92 aa)
TMTSSPRAMSLSTRWLPTKPAPPVTTIRGLRPVIPTGTRPVWEPDNRVRPERGRKLWDSGGPMRESVGWMMKNVEPMRIPTRMKRRRCSLRR*

>peptide 2 (60 aa)
MFCRVVIGMEHEHEHEHSSESVELKVLCSRHGCHFFYISIDGANSYVNASLTIIFFFFRI*

>peptide 3 (30 aa)
MPLFLYFNRWCQLLRECLSHHNFFFLPYLN*

>peptide 4 (45 aa)
DDDVVPTRYELVDEVAPDEARAAGDDDPRSSASDPDGDPARVGAG*

Sequence

>CNT30630546
TGACGATGACGTCGTCCCCACGCGCTATGAGCTTGTCGACGAGGTGGCTCCCGACGAAGCCCGCGCCGCCGGTGACGACGATCCGCGGTCTTCGGCCAGT
GATCCCGACGGGGACCCGGCCCGTGTGGGAGCCGGATAATCGAGTGAGGCCAGAGCGGGGGAGGAAGTTGTGGGACTCGGGTGGGCCTATGCGGGAGAGC
GTGGGCTGGATGATGAAAAACGTGGAGCCGATGAGAATCCCGACGAGGATGAAGAGAAGACGCTGCTCTCTGAGGAGGTAGTTGATGGATCTGGGGAGCG
ATCTGGTGTGCTTGATGGATTTGGGGGAGTAGGGTGAGGCCTCGCTGCTCGTCATCTCTTCCTCCCTTCTGTGATTCAGACTGGGTTGCTTGTGAAGCTG
TTTCATCTTACGGTTAAAAACAAAACGCAACGCTACCGCGTGTTTTTGACCAACGATGTTTTGTCGTGTTGTTATAGGGATGGAACACGAACACGAACAC
GAACACTCATCAGAAAGCGTGGAATTGAAGGTACTCTGCTCTCGCCATGGATGCCACTTTTTCTATATTTCAATCGATGGTGCCAACTCCTACGTGAATG
CCTCTCTCACCATAATTTTTTTTTTCTTCCGTATTTAAATTAACCGTATTCTTTGCTCAGTT