Detailed information on CNT30629896


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT006943, E-value = 1e-114

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3082954Vigna unguiculataBrassica juncea40.5113.5690160reverse complement

Expression of CNT30629896

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MFALLKPTFSLPLCPALLARVLPPKAERSPTDSF*

>peptide 2 (34 aa)
YFSVVALGTRLWLEAFSLPLITLKKQGHHASLNR*

>peptide 3 (40 aa)
LQRCSAWYSTLARGIFSTPYYPEKAGAPCILEPITIFRLT*

Sequence

>CNT30629896
TACTTCAGCGTTGTAGCGCTTGGTACTCGACTTTGGCTCGAGGCATTTTCTCTACCCCTTATTACCCTGAAAAAGCAGGGGCACCATGCATCCTTGAACC
GATAACCATCTTTCGGCTAACCTAGCCTCCTCCGTCCCTCGGGACCAACAAAGGGTAGTACAGGAATATTCACCTGTTGTCCATCGACTACGCCTAACGG
CTTGATCTTAGGCCCTAACTCAGCCTCCGTGGACGAACCTTGCGGAGGAACCCTTGGGTTTTCGGGGCATTGGATTCTCACCAATGTTTGCGTTACTCAA
GCCGACATTCTCGCTTCCGCTTTGTCCAGCACTGCTCGCGCGAGTCCTTCCCCCTAAGGCAGAACGCTCCCCTACCGATTCATTTTGACATCCCA