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Detailed information on CNT30629861


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30535409Vigna unguiculataEucalyptus grandis16.8827.8792.580reverse complement
CNT30547454Vigna unguiculataIpomoea triloba14.9821.6590.1471forward
CNT30703316Vigna unguiculataQuercus lobata30.3846.9184.72144forward
CNT30501219Vigna unguiculataCoffea canephora17.9326.8184.7185reverse complement
CNT30272829Vigna unguiculataChenopodium quinoa19.4129.9786.9692forward
CNT30727290Vigna unguiculataCorchorus capsularis14.7722.9592.8670forward
CNT3069056Vigna unguiculataQuercus suber29.1113.0684.78138forward
CNT30404033Vigna unguiculataBeta vulgaris29.9645.9583.1142forward
CNT30526253Vigna unguiculataPhaseolus vulgaris53.3883.2287.75253forward
CNT30200314Vigna unguiculataPisum sativum33.5468.8381.13159reverse complement
CNT30711188Vigna unguiculataGlycine max38.459.8785.71182forward
CNT3044357Vigna unguiculataPrunus dulcis14.7723.039070forward
CNT30561829Vigna unguiculataActinidia chinensis17.9323.8187.0685forward
CNT30587521Vigna unguiculataMusa acuminata17.5125.3886.7583forward
CNT3086859Vigna unguiculataVigna radiata53.884.4489.02255forward
CNT30538764Vigna unguiculataBrassica napus17.0926.7388.8981forward
CNT30238127Vigna unguiculataBrassica oleracea17.0926.5688.8981forward
CNT30172422Vigna unguiculataTrifolium pratense30.5945.8985.52145forward
CNT30145867Vigna unguiculataMedicago truncatula17.0926.7391.3681forward
CNT30264180Vigna unguiculataBrassica rapa16.6726.1688.6179forward
CNT30653438Vigna unguiculataRosa chinensis15.423.789.0473forward
CNT30128358Vigna unguiculataCorymbia citriodora15.1926.0990.2872reverse complement
CNT30714905Vigna unguiculataMalus domestica golden14.1422.1989.5567forward
CNT30479039Vigna unguiculataArabidopsis halleri15.1923.5388.8972forward
CNT30153271Vigna unguiculataPrunus persica14.7723.188.5770forward
CNT3029804Vigna unguiculataTheobroma cacao23.8436.8185.84113forward
CNT3024632Vigna unguiculataPopulus trichocarpa17.9328.0588.2485forward
CNT30120686Vigna unguiculataCitrus clementina16.6726.2588.6179reverse complement
CNT30174901Vigna unguiculataVigna angularis53.3883.2289.33253forward

Expression of CNT30629861

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MPACDSSEGIMMVGYRCGLSGLGLDCKMLACPLQVES*

Sequence

>CNT30629861
CCTAGACAAAAGAATGTAACCTCAGAGGTGTTCTGTCTCAACGTTCTCAAGTCCCACATTGCCCAAAACATAAATGAGTGAAGTCTTTATAAATGTTCTG
ACAAGGATGTCAGCTCGCCGAGTTGGGTAATGCCAGCTTGTGACTCAAGTGAGGGCATTATGATGGTGGGATATCGCTGTGGCTTATCTGGGTTGGGCCT
TGATTGCAAAATGTTGGCCTGCCCGCTCCAAGTTGAGAGTTGACTCATGGGACCTGAGTGAAGACCTGGGTTTCTTGAGTCCTAAGGTGGAGGGCACCGC
GTGAGGCTGGTTTCACAGAGCAGCGAAAACCTCCTTCTCCCGACAGTGGAGGGATAACAGGCTGCTGCAGTCAGTGTCCACTATAACCTAGTGAGTCTAG
TAAACCACCATCTTTTACGCAATTTTAGATATCATTATCTTATATTTTTTCCCTTCTTCTAGATGCTGTTCATA