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Detailed information on CNT30629841


BLAST search results

BLAST vs Swiss-Prot:
sp|Q39654|PSAL_CUCSA, E-value = 3e-60

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673169Vigna unguiculataSetaria viridis33.1650.6582.47194forward
CNT30520857Vigna unguiculataSetaria italica33.1620.5582.47194forward
CNT30639966Vigna unguiculataNymphaea colorata23.429.1381.02137forward
CNT30533956Vigna unguiculataEucalyptus grandis38.4632.2382.67225forward
CNT30516757Vigna unguiculataJuglans regia18.4621.8289.81108forward
CNT3021623Vigna unguiculataCitrullus lanatus27.0111.6382.91158forward
CNT30730016Vigna unguiculataCorchorus capsularis37.4433.0883.11219forward
CNT30507458Vigna unguiculataNicotiana attenuata32.1412.4881.38188forward
CNT30710011Vigna unguiculataGlycine max47.1863.8987.32276forward
CNT3042792Vigna unguiculataPrunus dulcis21.7134.4288.98127forward
CNT30635301Vigna unguiculataCapsicum annuum16.7524.6983.6798forward
CNT3094368Vigna unguiculataSolanum tuberosum32.1472.5980.85188forward
CNT30182270Vigna unguiculataSecale cereale26.8428.4483.44157forward
CNT30292923Vigna unguiculataTriticum aestivum32.9984.6584.46193forward
CNT30222283Vigna unguiculataHordeum vulgare24.133.5782.98141forward
CNT30390478Vigna unguiculataTriticum turgidum32.9916.1983.42193forward
CNT30564216Vigna unguiculataActinidia chinensis26.569.5185.81155forward
CNT3084712Vigna unguiculataVigna radiata26.3254.4296.75154forward
CNT30238125Vigna unguiculataBrassica oleracea20.3410.1582.35119forward
CNT30172489Vigna unguiculataTrifolium pratense20.179.1584.75118forward
CNT30438727Vigna unguiculataAegilops tauschii10.9420.2589.0664forward
CNT30249726Vigna unguiculataAvena sativa29.421.4583.72172forward
CNT30662078Vigna unguiculataTriticum dicoccoides12.4825.1786.373forward
CNT3075006Vigna unguiculataBrassica juncea21.3727.7883.2125forward
CNT30261201Vigna unguiculataBrassica rapa24.7916.3382.76145forward
CNT30614377Vigna unguiculataArabis alpina14.733.283.7286forward
CNT30454500Vigna unguiculataSaccharum spontaneum20.5133.1581.67120forward
CNT30135064Vigna unguiculataLolium perenne20.5121.0280.83120forward
CNT304588Vigna unguiculataZea mays29.5713.4181.5173forward
CNT30610860Vigna unguiculataGossypium raimondii12.1424.0787.3271forward
CNT30129085Vigna unguiculataCorymbia citriodora29.2316.2484.21171forward
CNT30683149Vigna unguiculataTriticum urartu29.438.8383.72172forward
CNT30720963Vigna unguiculataTriticum spelta22.3923.5283.21131forward
CNT30344813Vigna unguiculataEragrostis tef20.5122.9484.17120forward
CNT30620323Vigna unguiculataCajanus cajan40.3413.2185.59236forward
CNT30154501Vigna unguiculataPrunus persica25.347.4485.81148forward
CNT30570425Vigna unguiculataVitis vinifera28.729.6782.14168forward
CNT30644515Vigna unguiculataCannabis sativa2020.2487.18117forward
CNT3031830Vigna unguiculataTheobroma cacao34.5355.3483.66202forward
CNT3037832Vigna unguiculataCucumis melo29.2320.3181.87171forward
CNT30578384Vigna unguiculataOryza barthii15.5623.2186.8191forward
CNT30582252Vigna unguiculataEchinochloa crusgalli31.7928.2283.87186forward
CNT30556884Vigna unguiculataPanicum hallii33.1626.7284.02194forward
CNT30112090Vigna unguiculataFicus carica20.175.7690.68118forward
CNT30726871Vigna unguiculataLupinus angustifolius37.2612.1483.03218forward
CNT3049017Vigna unguiculataCucumis sativus27.0116.1182.28158forward

Expression of CNT30629841

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MLRITTSPPAASEPAAPAYSVFLRGPAFTNGPTRR*

Sequence

>CNT30629841
GAGTCATAAAATACATCATCATTTACATGCATCTCTATTGCACAAATAACTCTTCATTCATTGTCCATTTTTCATAGAGAATGAAATAGTAATAAAGAGA
GAAACAAATCACTTGATGTAGTAAGGAAGGTCCAAGACATAGAGGAGGAAGTAGGCCCAAATAACACCCGAAATGCCTCCGAAGAAGAAGCCCCCGGTGA
ACTTGGCCCATCCATCAGCGGTCTGGAGCTGATCGGGGAAGGGGCCGTGGATGCGTCTCCCTCGTTGAACGATGAGATCCCATAGATAGTAAGGACGATG
CTGAGAATCACCACAAGCCCACCAGCCGCGAGCGAGCCCGCTGCGCCGGCGTACTCGGTGTTCCTGAGAGGCCCGGCCTTCACGAATGGGCCGACGAGGA
GGTAGCCGTGGGCCAGGCCCACTTCGATGCCTCTGAGGAGTGGGCTCACTGCGGTCCTGTAAGCAGGGAGGTTGGACAGGTACCAGGCGATCAATGGGCT
GGATGTTACCGGCGTCTCGAGACTTCCGATGAATGGGTCACCGTTGATGGGCTGAATCACTTGATACGTTGGCTGCCACAAAAAA