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Detailed information on CNT30629673


BLAST search results

BLAST vs Swiss-Prot:
sp|P00865|RBS1_SOYBN, E-value = 2e-42

BLAST vs NONCODE:
NONCQUT001608, E-value = 3e-30

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3083811Vigna unguiculataVigna radiata47.2829.9887.98391forward

Expression of CNT30629673

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MGIWFKYKQRNKVVVGYKCSRLRSQGPCRQVCQFIKYTKYISIPQD*

>peptide 2 (68 aa)
MGMEARGLVGNETDALDLTNVVESNDTDEAVGVSSPGLYNLLQHLSSISAPKHRQLPHGPVPSIIVSR*

>peptide 3 (68 aa)
MSENRNQNYRMVESQKEKTKWEFGLNTNKETKWWWVTNVADLEARGLVGKFVNSLNIPNISPYLKIKL*

Sequence

>CNT30629673
CAGCAGCTAATGCATTAATTATCTCATCCATTCATGTCTGAAAACAGAAACCAAAATTACAGGATGGTGGAATCTCAGAAAGAGAAAACGAAATGGGAAT
TTGGTTTAAATACAAACAAAGAAACAAAGTGGTGGTGGGTTACAAATGTAGCAGACTTAGAAGCCAGGGGCCTTGTAGGCAAGTTTGTCAATTCATTAAA
TATACCAAATATATCTCCATACCTCAAGATTAAGCTCTAGCTTTCCACAGAAGATACTCCGGACAACAAAAAGAGAAAACGAAATGGAAATATGGTTTAA
ATACAAACAAAGAAGCAAAGTAGTGGGGGGGTTACAAATGTAGCAGACTTAGAAGCCAGGGGCCTTGTAGGCAATGAAACTGATGCACTGGACTTGACGA
ACGTTGTCGAATCCAATGATACGGACGAAGCCGTTGGGGTGAGCAGTCCTGGCCTCTACAACCTCCTGCAACACCTGAGTAGCATCAGTGCACCCAAACA
TAGGCAGCTTCCACATGGTCCAGTACCTTCCATCATAGTATCCAGGTGACCTGTTTTGCTCACGGTATGGGAATGGAAGCCAGGGGCCTTGTAGGCAATG
AAACTGATGCACTGGACTTGACGAACGTTGTCGAATCCAATGATACGGACGAAGCCGTTGGGGTGAGCAGTCCTGGCCTCTACAACCTCCTGCAACACCT
GAGTAGCATCAGTGCACCCAAACATAGGCAGCTTCCACATGGTCCAGTACCTTCCATCATAGTATCCAGGTGACCTGTTTTGCTCACGGTATGGGAATGG
GTCCTATAAACCAAAAACATCAAATCA