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Detailed information on CNT30629625


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3034379Vigna unguiculataTheobroma cacao21.610.3891.3681forward

Expression of CNT30629625

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MENLEEALVAKLEMGTAEANLDFEEERREGKAVIAELINVLAAIVWL*

>peptide 2 (56 aa)
ILKFFDFVFMECFRVLGVSQRIKSTTRVFLLLWVFLHAPLVLHKGNSKEFNDKNRG*

>peptide 3 (68 aa)
PFLSSLTLYSWNALGSLEYPKGSKAPPGYFFFSGSFSMLLWCSTKEIARNSMTRIVGSLASNQQSWKT*

Sequence

>CNT30629625
CCATTCTTAAGTTCTTTGACTTTGTATTCATGGAATGCTTTAGGGTCCTTGGAGTATCCCAAAGGATCAAAAGCACCACCAGGGTATTTCTTCTTCTCTG
GGTCTTTCTCCATGCTCCTTTGGTGCTCCACAAAGGAAATAGCAAGGAATTCAATGACAAGAATCGTGGGTAGCTTGGCATCCAATCAGCAGTCATGGAA
AACCTAGAAGAGGCATTGGTGGCAAAGCTGGAAATGGGAACTGCAGAGGCAAACCTTGATTTTGAGGAAGAAAGGAGAGAAGGGAAGGCTGTGATAGCAG
AGCTCATCAATGTGTTGGCAGCCATTGTTTGGCTCTGAAGAGTTGTGAGAATTGGTGAAGAGTGTGTGAATTGGG