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Detailed information on CNT30629601


BLAST search results

BLAST vs Swiss-Prot:
sp|P43286|PIP21_ARATH, E-value = 6e-37

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30535437Vigna unguiculataEucalyptus grandis24.1730.5383.49109forward
CNT30513856Vigna unguiculataJuglans regia23.7334.1985.98107forward
CNT30698271Vigna unguiculataQuercus lobata31.7145.483.22143forward
CNT3070602Vigna unguiculataQuercus suber43.6862.5482.23197forward
CNT30711842Vigna unguiculataGlycine max26.3950.6492.44119forward
CNT3044720Vigna unguiculataPrunus dulcis29.2720.0382.58132forward
CNT30596194Vigna unguiculataOryza meridionalis19.5120.2384.0988forward
CNT30572629Vigna unguiculataVitis vinifera15.7426.6992.9671forward
CNT3033609Vigna unguiculataTheobroma cacao23.0615.9881.73104forward
CNT3024289Vigna unguiculataPopulus trichocarpa44.5741.0280.1201forward
CNT30325169Vigna unguiculataAsparagus officinalis13.5323.0286.8961forward
CNT30116534Vigna unguiculataOryza nivara19.5120.3784.0988forward
CNT30176173Vigna unguiculataVigna angularis55.8882.6295.63252forward

Expression of CNT30629601

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MKIMPPKAQAMPRMPTPPQRSPPALTSLWLL*

>peptide 2 (59 aa)
MEEECGNELSNQGPVEGPLCEFFTIDQGCWRRVMVVLCREGTTLNIMLRHCNLQPPFSL*

Sequence

>CNT30629601
TGAGATTCCAGCAGTGCAGTAAACAAGGATGAAGATCATGCCACCGAAAGCCCAAGCAATGCCAAGAATGCCAACCCCACCACAGAGATCACCACCAGCC
TTGACATCACTCTGGCTCTTGTAACCAATGACAGTGAGGACTGTGATGTAAAGGAAGAGGAGTGTGGCAATGAACTCAGCAATCAAGGCCCTGTAGAAGG
ACCACTGTGTGAGTTCCTCACCATCAATGAAGGGTGCTGGAGGAGGGTCATGGAAGAGGAGTGTGGCAATGAACTCAGCAATCAAGGCCCTGTAGAAGGA
CCACTGTGTGAGTTCTTCACCATCGATCAAGGGTGCTGGAGGAGGGTCATGGTAGTCCTTTGCAGAGAAGGAACCACCCTCAACATCATGCTTCGCCATT
GCAATCTGCAACCACCCTTTTCACTCTGATCAAGAACCTGAAAGAGAAGCT