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Detailed information on CNT30629575


BLAST search results

BLAST vs Swiss-Prot:
sp|Q01667|CAB6_ARATH, E-value = 3e-41

BLAST vs NONCODE:
NONMTRT001455, E-value = 3e-66

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30515355Vigna unguiculataJuglans regia41.4627.6485.88170forward
CNT30525458Vigna unguiculataPhaseolus vulgaris37.568.4997.4154forward
CNT30708472Vigna unguiculataGlycine max23.6622.6693.8197forward
CNT30567058Vigna unguiculataActinidia chinensis20.2423.0684.3483forward
CNT30588696Vigna unguiculataMusa acuminata29.2744.6183.33120forward
CNT30236705Vigna unguiculataBrassica oleracea24.6321.4484.16101forward
CNT30171605Vigna unguiculataTrifolium pratense38.5412.6191.14158forward
CNT30609040Vigna unguiculataGossypium raimondii41.9537.3981.98172forward
CNT3058384Vigna unguiculataAmborella trichopoda34.1529.3582.14140forward
CNT3037808Vigna unguiculataCucumis melo30.4917.1585.6125forward
CNT30725493Vigna unguiculataLupinus angustifolius15.6123.9785.9464forward

Expression of CNT30629575

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MENLEEALVAKLEMGTAEANLDFEEERREGKAVIAELINVLAAIVWL*

>peptide 2 (56 aa)
ILKFFDFVFMECFRVLGVSQRIKSTTRVFLLLWVFLHAPLVLHKGNSKEFNDKNRG*

>peptide 3 (67 aa)
PFLSSLTLYSWNALGSLEYPKGSKAPPGYFFFSGSFSMLLWCSTKEIARNSMTRIVGSVPHGTGLPR*

Sequence

>CNT30629575
CCATTCTTAAGTTCTTTGACTTTGTATTCATGGAATGCTTTAGGGTCCTTGGAGTATCCCAAAGGATCAAAAGCACCACCAGGGTATTTCTTCTTCTCTG
GGTCTTTCTCCATGCTCCTTTGGTGCTCCACAAAGGAAATAGCAAGGAATTCAATGACAAGAATCGTGGGTAGTGTGCCCCATGGAACTGGGTTGCCTAG
GTAGGTAGCTTGGCATCCAATCAGCAGTCATGGAAAACCTAGAAGAGGCATTGGTGGCAAAGCTGGAAATGGGAACTGCAGAGGCAAACCTTGATTTTGA
GGAAGAAAGGAGAGAAGGGAAGGCTGTGATAGCAGAGCTCATCAATGTGTTGGCAGCCATTGTTTGGCTCTGAAGAGTTGTGAGAATTGGTGAAGAGTGT
GTGAATTGGG