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Detailed information on CNT30629544


BLAST search results

BLAST vs Swiss-Prot:
sp|P25698|EF1A_SOYBN, E-value = 3e-142

BLAST vs NONCODE:
NONGMAT001702, E-value = 5e-146

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30535563Vigna unguiculataEucalyptus grandis52.3848.5384.85396forward
CNT30371709Vigna unguiculataArabidopsis thaliana52.3861.4985.61396forward
CNT3021172Vigna unguiculataCitrullus lanatus52.3875.4387.63396forward
CNT30727585Vigna unguiculataCorchorus capsularis51.8529.0886.99392forward
CNT30525464Vigna unguiculataPhaseolus vulgaris51.7269.295.4391forward
CNT30503993Vigna unguiculataNicotiana attenuata25.469.8290.1192forward
CNT30712080Vigna unguiculataGlycine max38.2339.9289.27289forward
CNT30160120Vigna unguiculataPistacia vera51.9831.6288.3393forward
CNT30637620Vigna unguiculataCapsicum annuum37.8314.987.06286forward
CNT30224987Vigna unguiculataHordeum vulgare37.9697.2985.37287forward
CNT30564008Vigna unguiculataActinidia chinensis69.8469.3884.47528forward
CNT3084119Vigna unguiculataVigna radiata10042.4795.11756forward
CNT30541591Vigna unguiculataBrassica napus52.3833.6784.6396forward
CNT30509820Vigna unguiculataSolanum lycopersicum29.6310087.05224forward
CNT30146188Vigna unguiculataMedicago truncatula35.5834.2788.1269forward
CNT30665783Vigna unguiculataTriticum dicoccoides51.7242.9285.93391forward
CNT30310177Vigna unguiculataCamelina sativa52.3834.1485.35396forward
CNT3077051Vigna unguiculataBrassica juncea52.3834.3285.61396forward
CNT30614135Vigna unguiculataArabis alpina52.3825.3886.62396forward
CNT30598511Vigna unguiculataFraxinus excelsior45.2452.5385.67342forward
CNT30624959Vigna unguiculataDaucus carota43.5296.7686.93329forward
CNT30685098Vigna unguiculataTriticum urartu51.8526.6786.73392forward
CNT30350898Vigna unguiculataEragrostis tef52.3835.5587.12396forward
CNT30480841Vigna unguiculataArabidopsis halleri48.6859.2684.78368forward
CNT30368387Vigna unguiculataSorghum bicolor51.9845.5485.5393forward
CNT30355521Vigna unguiculataLactuca sativa49.4739.287.7374forward
CNT30151899Vigna unguiculataPrunus persica44.3130.3785.07335forward
CNT30424540Vigna unguiculataPapaver somniferum44.5843.6587.54337forward
CNT30706337Vigna unguiculataPrunus avium52.3833.9686.62396forward
CNT3052982Vigna unguiculataAmborella trichopoda44.9725.9986.76340forward
CNT3037774Vigna unguiculataCucumis melo89.1587.1984.87674forward
CNT30148140Vigna unguiculataBrachypodium distachyon24.7449.2189.84187forward
CNT30100761Vigna unguiculataOryza rufipogon44.4458.6485.71336forward
CNT30496615Vigna unguiculataDigitaria exilis80.2966.9284.51607forward
CNT30176122Vigna unguiculataVigna angularis51.7234.5496.16391forward
CNT30724009Vigna unguiculataLupinus angustifolius86.960.587.21657forward
CNT3050294Vigna unguiculataCucumis sativus52.3864.687.63396forward

Expression of CNT30629544

Peptides detected in this lncRNA

>peptide 1 (35 aa)
LAMTQEYKQETSIYCNHPLMNHHPARFTSSSGRPW*

>peptide 2 (84 aa)
MVHLNRFNFSCQSSWCKSHHHSRLDDTSLNTSHRHSSNTSNLVDILKRKPEGLVRWPLGLSDLVKSLKQGRSLVPVEVCGPLNHV

Sequence

>CNT30629544
CCTAGCGATGACACAAGAGTACAAGCAAGAAACCAGCATTTATTGTAACCATCCCCTGATGAACCACCACCCAGCACGATTCACTTCTTCTTCTGGGCGG
CCTTGGTGACCTTGGCTCCAGTAGGGTCTTTCTTCTCAACGTTCTTGATGACTCCCACAGCAACAGTCTGACGCATATCCCTCACAGCAAAACGTCCAAG
AGGTGGGTACTCAGAGAAGGTCTCCACCACCATTGGCTTGGTTGGAATCATCTTCACGAAACCAGCATCACCATTCTTCAAGAACTTAGGCTCCTTCTCG
AGCTCCTTACCAGAACGCCTGTCAATCTTGGTCATAAGTTCAGCAAACTTGACAGCAATGTGGGAGGTGAAGTTAGCAGCCTCCTTAGCAGGATCATCCT
TGGAGTTTGAAGCAACATAACCACGCTTGAGATCCTTAACAGCAACATTCTTCACATTGAACCCCACATTGTCACCAGGGAGAGCTTCTGTGAGAGCTTC
ATGGTGCATCTCAACAGATTTAACTTCAGTTGTCAATCCAGTTGGTGCAAAAGTCACCACCATTCCAGGCTTGATGACACCAGTCTCAACACGTCCCACA
GGCACAGTTCCAATACCTCCAATCTTGTAGACATCCTGAAGAGGAAGCCTGAGGGGCTTGTCAGATGGCCTCTTGGGCTCAGTGATTTGGTCAAGAGCCT
CAAGCAGGGTAGGTCCCTTGTACCAGTCGAGGTTTGTGGACCTCTCAATCATGTTG