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Detailed information on CNT30629525

BLAST search results

BLAST vs Swiss-Prot:
sp|O49169|EF1A_MANES, E-value = 6e-88

BLAST vs NONCODE:
NONMEST004097, E-value = 6e-101

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30691950	Vigna unguiculata	Oryza sativa	89.77	24.51	86.27	386	forward
CNT30678319	Vigna unguiculata	Setaria viridis	89.77	62.87	87.05	386	forward
CNT30520996	Vigna unguiculata	Setaria italica	89.77	30.98	87.56	386	forward
CNT30639730	Vigna unguiculata	Nymphaea colorata	89.77	42	83.68	386	forward
CNT30316757	Vigna unguiculata	Corylus avellana	89.07	31.97	87.99	383	forward
CNT30518094	Vigna unguiculata	Juglans regia	90	41.35	86.82	387	forward
CNT30618435	Vigna unguiculata	Sesamum indicum	64.88	56.82	86.38	279	forward
CNT30274113	Vigna unguiculata	Chenopodium quinoa	82.79	57.05	85.39	356	forward
CNT3020462	Vigna unguiculata	Citrullus lanatus	54.88	21.07	91.1	236	forward
CNT30380230	Vigna unguiculata	Manihot esculenta	89.77	15.91	87.05	386	forward
CNT30194937	Vigna unguiculata	Pisum sativum	90	38.74	86.56	387	forward
CNT30564256	Vigna unguiculata	Actinidia chinensis	89.77	33.16	86.01	386	forward
CNT30233993	Vigna unguiculata	Brassica oleracea	89.77	35.94	85.23	386	forward
CNT30173274	Vigna unguiculata	Trifolium pratense	89.77	28.7	90.67	386	forward
CNT30146334	Vigna unguiculata	Medicago truncatula	85.12	36.82	91.26	366	forward
CNT30439068	Vigna unguiculata	Aegilops tauschii	52.79	41.35	88.55	227	forward
CNT30246955	Vigna unguiculata	Avena sativa	89.77	21.87	86.79	386	forward
CNT3059230	Vigna unguiculata	Arabidopsis lyrata	89.77	32.11	85.23	386	forward
CNT30449969	Vigna unguiculata	Saccharum spontaneum	89.77	30.59	86.01	386	forward
CNT3011166	Vigna unguiculata	Zea mays	89.77	27.3	87.05	386	forward
CNT30608730	Vigna unguiculata	Gossypium raimondii	82.79	59.33	86.24	356	forward
CNT30228831	Vigna unguiculata	Ananas comosus	43.72	59.87	89.89	188	forward
CNT30651330	Vigna unguiculata	Rosa chinensis	55.12	53.74	89.87	237	forward
CNT30203420	Vigna unguiculata	Helianthus annuus	57.67	49.4	84.68	248	forward
CNT30127375	Vigna unguiculata	Corymbia citriodora	90	69.35	85.01	387	forward
CNT30368495	Vigna unguiculata	Sorghum bicolor	89.77	37.88	84.72	386	forward
CNT30424546	Vigna unguiculata	Papaver somniferum	86.28	31.41	86.25	371	forward
CNT3024315	Vigna unguiculata	Populus trichocarpa	89.77	50.59	84.72	386	forward
CNT30594462	Vigna unguiculata	Eragrostis curvula	89.77	33.16	87.56	386	forward
CNT30603788	Vigna unguiculata	Oryza punctata	89.77	32.77	86.53	386	forward
CNT30113122	Vigna unguiculata	Ficus carica	89.77	46.51	84.97	386	forward
CNT30724026	Vigna unguiculata	Lupinus angustifolius	89.77	26.81	89.9	386	forward

Expression of CNT30629525

Peptides detected in this lncRNA

>peptide 1 (93 aa)
MMMTWDVKLAASLAGSSLELDATKPRLRSFTATFFTLKPTLSPGRASWRASWCISTDLTSVVKPVGAKVTTIPGFKTPVSTRPTGTVPIPPIL*

>peptide 2 (62 aa)
SVAIEHWCIAVSDLARMVHDDDLGCEVGSFLGRVILGVGCNETTLEILHSNVLHVEANIVTW*

Sequence

>CNT30629525
AGTGTGGCAATCGAGCACTGGTGCATAGCCGTTTCCGATCTGGCCAGGATGGTTCATGATGATGACTTGGGATGTGAAGTTGGCAGCTTCCTTGGCAGGG
TCATCCTTGGAGTTGGATGCAACGAAACCACGCTTGAGATCCTTCACAGCAACGTTCTTCACGTTGAAGCCAACATTGTCACCTGGTAGAGCCTCTTGGA
GAGCCTCGTGGTGCATCTCAACAGACTTAACTTCAGTTGTCAAACCAGTGGGAGCAAAAGTCACCACCATACCAGGCTTCAAGACACCGGTCTCGACACG
TCCAACTGGCACGGTACCAATACCACCAATCTTGTAAACATCCTGCAAGGGGAGCCTGAGTGGCTTGTCTGAGGGCCTCTTGGGCTCTTGGTCCCTTGTA
CCAGTCAAGGTTGGTGGACCTCTCAATCAT