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Detailed information on CNT30629523


BLAST search results

BLAST vs Swiss-Prot:
sp|P07398|RBS3_WHEAT, E-value = 8e-37

BLAST vs NONCODE:
NONCQUT001608, E-value = 3e-30

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30727191Vigna unguiculataCorchorus capsularis46.8941.4879.46370forward
CNT30508846Vigna unguiculataSolanum lycopersicum23.4538.8784.86185forward
CNT30355748Vigna unguiculataLactuca sativa24.0838.6282.63190forward
CNT30705707Vigna unguiculataPrunus avium22.4315.7187.01177forward

Expression of CNT30629523

Peptides detected in this lncRNA

>peptide 1 (68 aa)
MSENRNQNYRMVESQKEKTKWEFGLNTNKETKWWWVTNVADLEARGLVGKFVNSLNIPNISPYLKIKL*

>peptide 2 (46 aa)
MGIWFKYKQRNKVVVGYKCSRLRSQGPCRQVCQFIKYTKYISIPQD*

Sequence

>CNT30629523
CAGCAGCTAATGCATTAATTATCTCATCCATTCATGTCTGAAAACAGAAACCAAAATTACAGGATGGTGGAATCTCAGAAAGAGAAAACGAAATGGGAAT
TTGGTTTAAATACAAACAAAGAAACAAAGTGGTGGTGGGTTACAAATGTAGCAGACTTAGAAGCCAGGGGCCTTGTAGGCAAGTTTGTCAATTCATTAAA
TATACCAAATATATCTCCATACCTCAAGATTAAGCTCTAGCTTTCCACAGAAGATACTCCGGACAACAAAAAGAGAAAACGAAATGGAAATATGGTTTAA
ATACAAACAAAGAAGCAAAGTAGTGGGGGGGTTACAAATGTAGCAGACTTAGAAGCCAGGGGCCTTGTAGGCAATGAAACTGATGCACTGGACTTGACGA
ACGTTGTCGAATCCAATGATACGGACGAAGCCGTTGGGGTGAGCAGTCCTGGCCTCTACAACCTCCTGCAACACCTGAGTAGCATCAGTGCACCCAAACA
TAGGCAGCTTCCACATGGTCCAGTACCTTCCATCATAGTATCCAGGGGCCTTGTAGGCAATGAAACTGATGCACTGGACTTGACGAACGTTGTCGAATCC
AATGATACGGACGAAGCCGTTGGGGTGAGCAGTCCTGGCCTCTACAACCTCCTGCAACACCTGAGTAGCATCAGTGCACCCAAACATAGGCAGCTTCCAC
ATGGTCCAGTACCTTCCATCATAGTATCCAGGTGACCTGTTTTGCTCACGGTATGGGAATGGGTCCTATAAACCAAAAACATCAAATCA