« Back to Vigna unguiculata search


Detailed information on CNT30629487


BLAST search results

BLAST vs Swiss-Prot:
sp|D7SFH9|LRL26_ARATH, E-value = 7e-65

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30525508Vigna unguiculataPhaseolus vulgaris38.9898.6280.84214forward
CNT3084079Vigna unguiculataVigna radiata82.755.2379.96454forward
CNT30171019Vigna unguiculataTrifolium pratense14.9424.1284.1582forward
CNT30146054Vigna unguiculataMedicago truncatula79.7832.3581.05438forward
CNT30149097Vigna unguiculataBrachypodium distachyon10.220.987.556forward
CNT30176115Vigna unguiculataVigna angularis68.6799.2194.16377forward

Expression of CNT30629487

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MLSFLGHNFASPKSDILGQKFSSKRILCGFMSKCRILVLQPLCK

>peptide 2 (45 aa)
MHHKPTTLILFAISSSSAFITSYGLTSLSTSSLLYAKCGKYISLV*

>peptide 3 (39 aa)
VSDRVGEENKGFGGISKEFTLPSNMSTTLLIVGLSFGSD*

Sequence

>CNT30629487
GTTTCTGATCGAGTAGGAGAAGAAAACAAAGGTTTTGGAGGCATTTCCAAGGAATTTACGTTACCTTCCAACATGTCTACAACTCTGCTCATTGTAGGTC
TATCATTTGGAAGTGATTGAATGCACCATAAGCCCACTACACTCATTCTCTTTGCAATCTCATCTTCTTCTGCATTCATCACTTCATATGGTCTCACATC
ATTATCCACATCAAGTCTTCTGTATGCAAAATGTGGGAAGTATATCTCACTTGTATGATCAGCTTTAGGATTAATGTTCCTCCTTCCTCCTACCATCTCT
AGTAGCATCATTCCATAACTATACACATCAGACTTTTGTGAAATTCCACCAAAATGTCTATTGGTCATTTCAGGAGCTAAATATCCCATTGTTCCTCTTG
TACCAGAAATAGAAATAATGCTTTCATTCCTGGGACACAACTTTGCTAGTCCAAAATCTGATATTTTAGGACAAAAATTCTCATCCAAAAGAATATTATG
CGGCTTTATGTCAAAATGTAGAATTTTAGTACTGCAGCCCCTGTGCAAG