« Back to Vigna unguiculata search


Detailed information on CNT30629386


BLAST search results

BLAST vs Swiss-Prot:
sp|Q6VAG0|TBA2_GOSHI, E-value = 2e-15

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692476Vigna unguiculataOryza sativa5022.5190.7129forward
CNT30670745Vigna unguiculataSetaria viridis57.3623.3192.57148forward
CNT30522155Vigna unguiculataSetaria italica100.7829.5883.08260forward
CNT30641074Vigna unguiculataNymphaea colorata58.5341.1489.4151forward
CNT30377201Vigna unguiculataArabidopsis thaliana51.5523.2584.96133forward
CNT30727252Vigna unguiculataCorchorus capsularis41.4714.2985.98107forward
CNT30402401Vigna unguiculataBeta vulgaris52.7111.4581.62136forward
CNT30196370Vigna unguiculataPisum sativum35.669.6582.6192forward
CNT30486254Vigna unguiculataOlea europaea49.6133.4282.81128forward
CNT30708222Vigna unguiculataGlycine max47.6730.5282.11123forward
CNT3092760Vigna unguiculataSolanum tuberosum21.718.0987.556forward
CNT30291318Vigna unguiculataTriticum aestivum37.9829.4387.7698forward
CNT30223001Vigna unguiculataHordeum vulgare31.0128.7888.7580forward
CNT30390564Vigna unguiculataTriticum turgidum31.0126.3291.2580forward
CNT30567082Vigna unguiculataActinidia chinensis42.642584.55110forward
CNT30586804Vigna unguiculataMusa acuminata39.1513.0884.16101forward
CNT30542792Vigna unguiculataBrassica napus40.3123.9685.58104forward
CNT30511260Vigna unguiculataSolanum lycopersicum28.6818.3686.4974forward
CNT30553024Vigna unguiculataOryza glaberrima86.0515.5586.04222forward
CNT30442409Vigna unguiculataAegilops tauschii64.7324.9385.03167forward
CNT30253208Vigna unguiculataAvena sativa87.2118.7284.44225forward
CNT30261872Vigna unguiculataBrassica rapa60.8517.7484.08157forward
CNT30614070Vigna unguiculataArabis alpina41.477.7488.79107forward
CNT3015820Vigna unguiculataZea mays55.4331.2987.41143forward
CNT3041960Vigna unguiculataChlamydomonas reinhardtii31.423.7583.9581forward
CNT30608822Vigna unguiculataGossypium raimondii47.2918.2183.61122forward
CNT30209019Vigna unguiculataHelianthus annuus49.6115.3381.25128forward
CNT30627268Vigna unguiculataDaucus carota47.299.8581.97122forward
CNT30681848Vigna unguiculataTriticum urartu55.4316.1684.62143forward
CNT30722427Vigna unguiculataTriticum spelta64.7328.8986.23167forward
CNT30341625Vigna unguiculataEragrostis tef58.5315.4988.08151forward
CNT30361407Vigna unguiculataSorghum bicolor58.9129.7590.79152forward
CNT30595966Vigna unguiculataOryza meridionalis65.8927.7388.24170forward
CNT30370114Vigna unguiculataOryza glumipatula65.8920.7688.24170forward
CNT30706519Vigna unguiculataPrunus avium58.5318.2180.13151forward
CNT3033661Vigna unguiculataTheobroma cacao44.9655.7781.9116forward
CNT3057373Vigna unguiculataAmborella trichopoda31.7815.0585.3782forward
CNT3024644Vigna unguiculataPopulus trichocarpa55.436.9980.42143forward
CNT30322043Vigna unguiculataAsparagus officinalis36.8211.3586.3295forward
CNT30119164Vigna unguiculataCitrus clementina27.5215.2487.3271forward
CNT30330123Vigna unguiculataDioscorea rotundata30.627.7686.0879forward
CNT3099512Vigna unguiculataOryza rufipogon62.426.9288.2161forward
CNT30575530Vigna unguiculataOryza barthii65.8918.8388.24170forward
CNT30117026Vigna unguiculataOryza nivara55.4321.2883.92143forward
CNT30333708Vigna unguiculataCynara cardunculus36.8211.7388.4295forward

Expression of CNT30629386

Peptides detected in this lncRNA

>peptide 1 (85 aa)
LRGVPMQESLSLEHDGELIGDAPEHLLDGEAGGGNVAHARLHVVRNPLHEVRRVLVLHVYHLLVHLLRAHLPAEHRRRRQVPSVPG

>peptide 2 (57 aa)
MERPVGGMSHTLDFTLFGIHSTKYDEFLFCTFIICWSTSFVLIFPRNIADAVRYRPCR

Sequence

>CNT30629386
CTCCGCGGTGTACCAATGCAAGAAAGCCTTTCTCTTGAACATGACGGTGAACTGATCGGAGACGCGCCGGAACATCTCCTGGATGGAGAGGCCGGTGGGG
GGAATGTCGCACACGCTCGACTTCACGTTGTTCGGAATCCACTCCACGAAGTACGACGAGTTCTTGTTCTGCACGTTTATCATCTGCTGGTCCACCTCCT
TCGTGCTCATCTTCCCGCGGAACATCGCCGACGCCGTCAGGTACCGTCCGTGCCGGGG