« Back to Vigna unguiculata search


Detailed information on CNT30629341


BLAST search results

BLAST vs Swiss-Prot:
sp|O82709|CALX_PEA, E-value = 1e-143

BLAST vs NONCODE:
NONGMAT001818, E-value = 4e-163

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30676366Vigna unguiculataSetaria viridis15.0241.9482.32164forward
CNT30377662Vigna unguiculataArabidopsis thaliana28.2134.0782.14308forward
CNT30709122Vigna unguiculataGlycine max20.764.292.04226forward
CNT30164689Vigna unguiculataPistacia vera16.123287.5176forward
CNT30395817Vigna unguiculataTriticum turgidum46.9866.3678.56513forward
CNT30238817Vigna unguiculataBrassica oleracea11.924.3983.85130forward
CNT30144977Vigna unguiculataMedicago truncatula36.4543.2184.92398forward
CNT30264134Vigna unguiculataBrassica rapa26.1932.9978.67286forward
CNT30140632Vigna unguiculataLolium perenne8.9748.0482.6598forward
CNT30605054Vigna unguiculataGossypium raimondii38.173.3782.93416forward
CNT30126269Vigna unguiculataCorymbia citriodora19.0554.8879.81208forward
CNT30686114Vigna unguiculataTriticum urartu27.5650.3380.07301forward
CNT30349705Vigna unguiculataEragrostis tef24.6338.3781.78269forward
CNT30365925Vigna unguiculataSorghum bicolor27.8434.2380.92304forward
CNT3038556Vigna unguiculataCucumis melo3852.5379.28415forward
CNT30149228Vigna unguiculataBrachypodium distachyon27.3862.9579.6299forward
CNT30101562Vigna unguiculataOryza rufipogon28.335.7682.85309forward
CNT30585446Vigna unguiculataEchinochloa crusgalli13.147.3583.92143forward
CNT30116414Vigna unguiculataOryza nivara15.2959.6482.04167forward
CNT30333676Vigna unguiculataCynara cardunculus19.2340.782.38210forward
CNT30725707Vigna unguiculataLupinus angustifolius34.9869.3384.82382forward

Expression of CNT30629341

Peptides detected in this lncRNA

>peptide 1 (61 aa)
SAFCFSFSTENLGFQVVSRYDSAILSSLAIKMLSNKMPSCIVQISIPIAAIGSKSGFLSSK*

>peptide 2 (60 aa)
MPFSLISRIPLHWPLPLTTAWGGFTFWVLNLWGFPFTILLIVPIFRFCGLWIIYLLRFII*

>peptide 3 (28 aa)
MKCTLFVEPHLSGPNMIEYGDSLSNSLGF

>peptide 4 (60 aa)
MPFSLISRIPLHWPLPLTTAWGGFTFWVLNLWGFPFTILLIVPIFRFCGLWIIYLLRFII*

>peptide 5 (43 aa)
MVFNILPSLGILVFENEVYFVCGTTFIRTEHDRIRRFVVKFLRF

Sequence

>CNT30629341
CCTCTGCCTTCTGTTTCTCTTTTTCAACTGAAAACTTGGGTTTCCAAGTAGTCTCCCGATACGACTCAGCAATTTTATCATCTTTAGCTATCAAGATGTT
GTCAAACAAAATGCCATCTTGCATTGTCCAAATCTCAATACCAATAGCTGCGATTGGCTCAAAATCAGGTTTCTTAAGTTCAAAGTAAGCAGGGTTTGGA
ATATCCCTAGGTTTCCATATACCCTTATAAGCAGGATTTTCAATGAGTGGTGCATGCCATTTTCCCTTATAAGCAGGATTCCTCTTCATTGGCCTCTTCC
ACTCACCACAGCCTGGGGCGGCTTCACATTTTGGGTTCTCAATCTTTGGGGCTTCCCATTCACCATCCTCCTCATCGTCCCAATCTTCCGGTTTTGTGGC
CTCTGGATCATCTATCTCCTCCGGTTCATCATCTAACCATCCTTCAGGATTTTCAATGAGTGGTGCATGCCATTTTCCCTTATAAGCAGGATTCCTCTTC
ATTGGCCTCTTCCACTCACCACAGCCTGGGGCGGCTTCACATTTTGGGTTCTCAATCTTTGGGGCTTCCCATTCACCATCCTCCTCATCGTCCCAATCTT
CCGGTTTTGTGGCCTCTGGATCATCTATCTCCTCCGGTTCATCATCTAACCATCCTTCAGGTTTTTCAGCTTCTTCATCAACAATTTCCAAGGGTGCATC
CTCATCCCAGTCGTCTGGCTTTACCGCACTTGGGTCTGGAATTTTCTCTCTCTCATCCCAGTCCTCAGGCTTCTTATCGTCAGCATCTGGGATTGTCTTG
GGAGGGATAAGAGGAGGTTCAAAATCATCAGCACTCAAGAAGTTTGCCTTCTTCTTCTGTTCCCCATCTACCAAAATTTGCACCTCATTGTCAGGCTTCA
AAATAGCCGTGTAAACATGAGATAATTTATCAGAAGGGACAGAAGGGGGAGCCTTAAGATGGTGTTCAACATACTCCCCAGTCTTGGGATTCTTGTGTTT
GAAAATGAAGTGTACTTTGTTTGTGGAACCACATTTATCAGGACCGAACATGATAGAATACGGAGATTCGTTGTCAAATTCCTTAGGTTTCC