« Back to Vigna unguiculata search


Detailed information on CNT30629265


BLAST search results

BLAST vs Swiss-Prot:
sp|P31196|RBL_NEMMU, E-value = 1e-69

BLAST vs NONCODE:
NONORUT002429, E-value = 2e-69

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690840Vigna unguiculataOryza sativa41.2510.1188.44467forward
CNT30678101Vigna unguiculataSetaria viridis20.4965.9189.22232forward
CNT3019929Vigna unguiculataCitrullus lanatus21.8256.9193.93247forward
CNT30201084Vigna unguiculataPisum sativum54.6828.1986.91619forward
CNT30182914Vigna unguiculataSecale cereale42.0525.7787.61476forward
CNT30290424Vigna unguiculataTriticum aestivum38.1627.0288.89432forward
CNT30565170Vigna unguiculataActinidia chinensis42.0541.6891.81476forward
CNT3089355Vigna unguiculataVigna radiata14.5827.6893.33165forward
CNT30539441Vigna unguiculataBrassica napus37.18.5992.14420forward
CNT30237333Vigna unguiculataBrassica oleracea37.127.2691.9420forward
CNT30554212Vigna unguiculataOryza glaberrima41.2512.3888.44467forward
CNT30146680Vigna unguiculataMedicago truncatula35.8732.489.9406forward
CNT30435662Vigna unguiculataAegilops tauschii16.7859.5689.47190forward
CNT30258280Vigna unguiculataAvena sativa38.1687.4590.51432forward
CNT3060115Vigna unguiculataArabidopsis lyrata23.3211.1394.7264forward
CNT3017995Vigna unguiculataZea mays41.2530.2388.01467forward
CNT30683050Vigna unguiculataTriticum urartu38.1631.6788.89432forward
CNT30356508Vigna unguiculataLactuca sativa27.5644.6493.27312forward
CNT30480921Vigna unguiculataChara braunii16.4324.4785.48186forward
CNT30434475Vigna unguiculataPapaver somniferum27.4780.9991311forward
CNT30323704Vigna unguiculataAsparagus officinalis15.0257.2491.76170forward
CNT30121217Vigna unguiculataCitrus clementina42.0553.0789.71476forward

Expression of CNT30629265

Peptides detected in this lncRNA

>peptide 1 (62 aa)
MAQPNLFFFNLILFFNFEIERSNLNNNNNLFLILTVIYVVYVNPRCKNRQLSPRKIKKEVKK*

Sequence

>CNT30629265
GGTCTTTATTCTTATATAGTGCTCTACTTTCTCATTTCTGGTCAATGTGGGACTTAGACTCACACTTGTATTCCTAACAATCTCCCCCTCAAGGGTGAGT
CCCTTCAACCACATTGGTACACCCTCCTCCAGCGGAAGCTGCCCAACCACGAGTACTCCTTTTCTGCCCTTTTCTGTACCGCCGTTATTCTTAACGGAGC
ACGCAGTGCCTTGAACCCAAATACATTACCGACAATAGAAGTAAACATGTTAGTAACAGAACCTTCTTCAAAAAGGTCTAAAGGATAAGCTACGTAAGCA
ATATATTGATTTTCTTCCCCAGCAACAGGTTCGATGTGATAGCATCGTCCTTTGTAACGATCAAGACTGGTAAGCCCATCGGTCCACACAGTTGTCCATG
TACCAGTAGAAGATTCGGCGGCTACCGCAGCACCTGCTTCTTCAGGTGGAACTCCAGGTTGAGGAGTTACTCGAAATGCTGCCAAGATATCAGTATCTTT
GGTTTCATACTCAGGAGTATAATAATTCAATTTCTAATCTTTAACACCAGCTTTGAACCCAACACTTGCTTTAGTCTCTGTTTGTGGTGACATAAATCCC
TCCCTACAACTCTTGAATTAAGAATTCTTGAAACAATAAGGTCTACTCGATATGACTTAGGAGTTAATGAAATCTTTTACAAAAATCAACTACTATTATC
AATTAATCCCAAAGGTTCGTTATGTTATTATTAAATTAAACGATGGTATTTGATTTGTCAAATACATCATTATTGTATACTCTTTTCTATGTATGGCGCA
ACCCAATCTTTTTTTTTTCAATTTGATCTTATTTTTTAATTTTGAAATCGAAAGATCTAATCTAAATAATAATAATAATTTATTCTTAATCTTGACAGTG
ATATATGTTGTCTATGTAAATCCTAGATGTAAAAATAGGCAGCTTTCTCCCCGGAAAATAAAAAAAGAGGTCAAAAAATAGGGAAACAGAGGGTAAGTCT
AAAAAATTGTCTACTGAGGAAATACGAAAGCCAATGATAAAAAAAATGAATTCTAAATTAAGGTACAGGTTCGAATTCCATACAGAATATAGATGATATT
TTCTAGAATGATAGAAAAAAAGAAAAGACTTT