Detailed information on CNT30629257


BLAST search results

BLAST vs Swiss-Prot:
sp|P14009|14KD_DAUCA, E-value = 4e-25

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692333Vigna unguiculataOryza sativa15.9724.5382.6192forward
CNT30712211Vigna unguiculataGlycine max37.1533.1385.51214forward
CNT3046524Vigna unguiculataPrunus dulcis14.4123.9985.5483forward
CNT30187285Vigna unguiculataSecale cereale15.9724.8682.6192forward
CNT30589645Vigna unguiculataMusa acuminata22.2223.6282.03128forward

Expression of CNT30629257

Peptides detected in this lncRNA

>peptide 1 (59 aa)
MPKMLALRAVQRQTAASRSARPWMSSQHGVFGGFPSCTPIKPNTSAHTPNLRVSAGQVP*

>peptide 2 (28 aa)
MFRHNTRATFEAISHCCYKFFTLTTLWFG

>peptide 3 (62 aa)
MVGVSELSVGVCRASPIVCGRWLWHRCVWWVFRSFRWWVAWHVCAAYHTEKQDVQTQHKSNL*

Sequence

>CNT30629257
CTTAGGACATGGTGATTTAAGTTTATGAAAGTGTTTGTTTAGTTGCAGAGGAAATCCTTAGGAGTTTTCTTTCCACAGTAGTTGAGGAGCAAGTTGAGCT
TGACGGGAACATTGAGGTTGATGCCCAAGATGTTAGCTTTGAGAGCGGTGCAGAGGCAGACGGCGGCTTCAAGATCGGCGAGGCCGTGGATGAGTTCGCA
GCACGGCGTCTTCGGTGGCTTCCCAAGCTGCACGCCGATCAAACCCAACACATCAGCGCACACACCAAACTTAAGGGTGTCTGCAGGGCAAGTCCCATAG
TTTGTGGAAGGTGGCTTTGGCACAGGTGTGTATGGTGGGTGTTTCGGAGCTTTCGGTGGGTGTCTGCAGGGCAAGTCCCATAGTTTGTGGAAGGTGGCTT
TGGCACAGGTGTGTATGGTGGGTGTTTCGGAGCTTTCGGTGGTGGGTTGCATGGCACGTATGTGCAGCTTACCACACTGAAAAACAAGATGTTCAGACAC
AACACAAGAGCAACCTTTGAAGCCATTTCACACTGCTGTTACAAGTTCTTCACTCTTACAACACTGTGGTTTGGTT