« Back to Vigna unguiculata search


Detailed information on CNT30629221


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG85|UBI1P_NICSY, E-value = 0.0

BLAST vs NONCODE:
NONMTRT001024, E-value = 3e-164

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30512897Vigna unguiculataJuglans regia62.6481.3682.94803forward
CNT30525138Vigna unguiculataPhaseolus vulgaris87.2968.4490.081119forward
CNT30637458Vigna unguiculataCapsicum annuum82.0623.9680.991052forward
CNT3086240Vigna unguiculataVigna radiata87.2169.8389.451118forward
CNT30145430Vigna unguiculataMedicago truncatula85.862.6484.451100forward
CNT30311185Vigna unguiculataCamelina sativa81.8379.2381.891049forward
CNT30605737Vigna unguiculataGossypium raimondii57.4996.7283.58737forward
CNT30706356Vigna unguiculataPrunus avium80.4274.2381.961031forward
CNT30174484Vigna unguiculataVigna angularis35.5793.2588.82456forward

Expression of CNT30629221

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MVFPVNVFTKICIPPRSLKTRCRVDSFWIL*

>peptide 2 (30 aa)
MVFPVRVFTNICIPPRSLNTRCRVDSFWML*

>peptide 3 (50 aa)
MPSLSWILALTLSMVSELSTSKVMVFPVKVFTKICIPPLNRSTKWRVDSF*

>peptide 4 (37 aa)
MVSELSTSRVMVFPVKVLTKICMPPLKRSTKWSVDSF*

>peptide 5 (40 aa)
MVSELSTSKVMVFPVNVFTKICIPPRSLKTKCRVDSFWML*

Sequence

>CNT30629221
CGAGAAAGATATTTTTTATTTGATTTAAAGAACACACGAGTTCAGGGGATCATTTTGAAAACATAACAGCAGTACATACATACACAATCTGGTGATCAAG
AGTACAAGGAAACAACAGTTGGTGAAAAGTGAAAAAGTTAGAAGCCACCGCGAAGGCGAAGGACAAGGTAATGGTCTTTCCTGTCAGAGTCTTCACAAAT
ATCTGCATTCCACCACGAAGCCTCAACACCAGGTGCAGAGTAGATTCCTTCTGGATGTTATAATCAGCAAGGGTTCGCCCATCTTCCAGCTGCTTCCCAG
CAAAGATAAGCCTTTGCTGGTCTGGTGGAATACCCTCTTTGTCCTGGATCTTTGCCTTTACATTATCAATGGTATCAGAACTTTCAACCTCCAAAGTAAT
GGTCTTTCCTGTCAACGTCTTTACAAAAATTTGCATTCCACCACGAAGCCTCAAAACCAAGTGCAGGGTAGATTCTTTCTGGATGTTGTAATCCGCAAGG
GTCCTTCCATCTTCAAGCTGTTTCCCGGCAAAGATAAGCCTCTGCTGATCTGGGGGGATACCCTCCTTATCCTGAATCTTTGCTTTCACATTGTCAATTG
TATCTGAACTCTCCACTTCCAAAGTTATGGTCTTTCCTGTCAACGTCTTTACAAAAATTTGCATTCCACCACGAAGCCTCAAAACCAGGTGCAGGGTAGA
TTCCTTCTGGATATTATAATCCGCAAGAGTTCTTCCATCTTCAAGCTGTTTCCCGGCGAAGATAAGCCTCTGCTGGTCTGGGGGAATACCCTCCTTATCC
TGAATCTTGGCTTTCACATTATCAATGGTATCTGAACTCTCGACCTCAAGGGTAATGGTCTTCCCAGTCAAAGTCTTGACAAAGATTTGCATGCCACCCC
TCAAACGAAGCACCAAGTGGAGCGTGGACTCCTTCTGAATATTGTAATCGGCAAGGGTCCTTCCATCCTCCAGTTGTTTACCAGCAAAAATAAGCCTCTG
CTGATCCGGAGGGATGCCCTCTTTGTCTTGGATCTTGGCCTTGACATTATCAATGGTATCTGAACTCTCCACCTCCAAGGTTATGGTTTTTCCAGTTAAA
GTCTTCACAAAAATCTGCATACCACCTCTTAATCGAAGCACCAAGTGGAGGGTGGACTCCTTCTGAATATTGTAATCGGCAAGGGTTCTCCCATCCTCGA
GTTGTTTACCAGCAAAAATTAACCTTTGTTGATCCGGAGGGATACCCTCTTTGTCCTGGATCTTAGCCTTGACATTATCAAT