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Detailed information on CNT30629220


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG84|UBI4P_NICSY, E-value = 0.0

BLAST vs NONCODE:
NONTPRT002153, E-value = 1e-162

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30532219Vigna unguiculataEucalyptus grandis76.5749.1782.95827forward
CNT30279021Vigna unguiculataChenopodium quinoa86.0271.2483.42929forward
CNT30727322Vigna unguiculataCorchorus capsularis78.5266.7282.19848forward
CNT30379426Vigna unguiculataManihot esculenta78.5273.2383.84848forward
CNT30406246Vigna unguiculataBeta vulgaris60.9398.0683.89658forward
CNT30200107Vigna unguiculataPisum sativum63.5277.4388.05686forward
CNT30709517Vigna unguiculataGlycine max83.2496.7785.43899forward
CNT30156153Vigna unguiculataPistacia vera82.0476.9184.09886forward
CNT30636081Vigna unguiculataCapsicum annuum8549.7682.68918forward
CNT3096981Vigna unguiculataSolanum tuberosum87.0483.784.36940forward
CNT3086353Vigna unguiculataVigna radiata82.4141.5393.15890forward
CNT30511508Vigna unguiculataSolanum lycopersicum83.3368.8183.11900forward
CNT30172216Vigna unguiculataTrifolium pratense8553.8783.55918forward
CNT30145547Vigna unguiculataMedicago truncatula89.5448.5985.42967forward
CNT30312399Vigna unguiculataCamelina sativa82.1367.9282.75887forward
CNT3073617Vigna unguiculataBrassica juncea82.1326.2682.86887forward
CNT30605389Vigna unguiculataGossypium raimondii82.4190.2683.03890forward
CNT3066849Vigna unguiculataLeersia perrieri82.1366.3982.75887forward
CNT30623044Vigna unguiculataDaucus carota88.2448.3383.21953forward
CNT30423866Vigna unguiculataPapaver somniferum83.5270.5283.15902forward
CNT30642981Vigna unguiculataCannabis sativa80.1977.1882.68866forward
CNT3032244Vigna unguiculataTheobroma cacao84.3579.2983.32911forward
CNT30330420Vigna unguiculataDioscorea rotundata79.3550.6582.15857forward
CNT30595410Vigna unguiculataEragrostis curvula87.5969.3583.09946forward
CNT30603625Vigna unguiculataOryza punctata82.3167.8182.34889forward
CNT30111771Vigna unguiculataFicus carica80.2869.5883.51867forward
CNT30724005Vigna unguiculataLupinus angustifolius84.2670.4983.19910forward
CNT3050995Vigna unguiculataCucumis sativus89.9187.2482.29971forward

Expression of CNT30629220

Peptides detected in this lncRNA

>peptide 1 (29 aa)
KKGIVQEHKKKKKKERLHVHIIHQINKGP*

>peptide 2 (85 aa)
MQGRLFLNVVIGKGSAILKLFSSKNEPLLVWWDTLFVLNLSLDIVNGVRAFHFKSDCLSRQCLHKDLHSTTETEHKVESGLLLNVV

>peptide 3 (50 aa)
MPSLSCIFAFTLSIVSELSTSKVIVFPVRVLTKICIPPRSRKTRWRVDSF*

>peptide 4 (48 aa)
MKSGLLLNVVISQSTSILKLLSSKNQPLLIWRNALLVLYLCLHIVNRV*

>peptide 5 (40 aa)
MVSELSTSRVMVFPVRVLTKICIPPRRRSTKCRVDSFWML*

>peptide 6 (37 aa)
MVSELSTSSVIVFPVRVFTKICIPPRRRSTKCRVDSF*

>peptide 7 (37 aa)
MVSELSTSRVIVFPVNVFTKICIPPRRRSTRWRVDSF*

Sequence

>CNT30629220
GAAAAAAGGGGATAGTTCAGGAACATAAAAAAAAAAAAAAAAAAGAGCGGCTACACGTCCACATAATTCACCAAATCAACAAGGGACCTTGATAACATAA
TCAAATTTAAAAGCCACCACGAAGACGCAATACGAGATGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGCCAGAGTACGTCCATCCTCAAGCTGCTTT
CCAGCAAAAATCAACCTTTGCTGATCTGGAGGAATGCCCTCCTTGTCCTGTATCTTTGCCTTCACATTGTCAATCGTGTCTGAACTCTCGACCTCCAAAG
TAATAGTTTTTCCAGTAAGAGTCTTGACAAAAATCTGCATTCCACCACGGAGTCGCAAGACAAGATGGAGAGTTGACTCTTTCTGAATGTTATAATCTGC
CAAGGTTCGGCCATCTTCTAGTTGCTTTCCGGCAAATATGAGCCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCTTGAATCTTGGCCTTCACATTGTCT
ATGGTGTCAGAGCTTTCCACCTCAAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACAAAGATTTGCATACCACCACGAAGACGCAGCACCAAGTGTAGGG
TAGACTCCTTTTGGATGTTGTAATCAGCCAAGGTTCGGCCATCTTCAAGTTGCTTTCCAGCAAAGATGAGCCTCTGTTGGTCTGGTGGAATACCCTCTTT
GTCTTGAATCTTGGCCTTAACGTTGTCAATGGTGTCTGAGCTTTCTACCTCAAGTGTGATTGTCTTTCCAGTGAGGGTCTTCACAAAAATTTGCATACCA
CCACGGAGACGAAGCACCAAATGCAGGGTAGACTCTTTCTGAATGTTGTAATCGGCAAGGGTTCGGCCATCCTCAAGCTGTTTTCCAGCAAAAATGAGCC
TTTGCTGGTCTGGTGGGATACCCTCTTTGTCCTGAATCTTAGCCTTGACATTGTCAATGGTGTCAGAGCTTTCCACTTCAAGAGTGATTGTCTTTCCCGT
CAATGTCTTCACAAAGATTTGCATTCCACCACGGAGACGGAGCACAAGGTGGAGAGTGGACTCCTTTTGAATGTTGTAAT