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Detailed information on CNT30629116


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 0.0

BLAST vs NONCODE:
NONMTRT001024, E-value = 5e-156

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30500348Vigna unguiculataCoffea canephora84.7856.6182.04852forward
CNT3020367Vigna unguiculataCitrullus lanatus85.3776.481.82858forward
CNT30609009Vigna unguiculataGossypium raimondii85.3789.9482.4858forward

Expression of CNT30629116

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MVFPVNVFTKICIPPRSLKTRCRVDSFWIL*

>peptide 2 (37 aa)
MVSELSTSRVMVFPVKVLTKICMPPLKRSTKWSVDSF*

>peptide 3 (30 aa)
MVFPVRVFTNICIPPRSLNTRCRVDSFWML*

Sequence

>CNT30629116
TGAAACGAGAAAGATATTTTTTATTTGATTTAAAGAACACACGAGTTCAGGGGATCATTTTGAAAACATAACAGCAGTACATACATACACAATCTGGTGA
TCAAGAGTACAAGGAAACAACAGTTGGTGAAAAGTGAAAAAGTTAGAAGCCACCGCGAAGGCGAAGGACAAGGTGGAGGGTGGATTCCTTCTGAATGTTG
TAGTCTGCCAAGGTGCGACCATCTTCCAATTGTTTCCCAGCAAAAATAAGCCTCTGCTGATCTGGTGGAATGCCCTCCTTGTCTTGAATCTTTGCTTTCA
CATTATCAATTGTATCAGAGCTCTCCACCTCCAAGGTAATGGTCTTTCCTGTCAGAGTCTTCACAAATATCTGCATTCCACCACGAAGCCTCAACACCAG
GTGCAGGGTAGATTCTTTCTGGATGTTGTAATCCGCAAGGGTCCTTCCATCTTCAAGCTGTTTCCCGGCAAAGATAAGCCTCTGCTGATCTGGGGGGATA
CCCTCCTTATCCTGAATCTTTGCTTTCACATTGTCAATTGTATCTGAACTCTCCACTTCCAAAGTTATGGTCTTTCCTGTCAACGTCTTTACAAAAATTT
GCATTCCACCACGAAGCCTCAAAACCAGGTGCAGGGTAGATTCCTTCTGGATATTATAATCCGCAAGAGTTCTTCCATCTTCAAGCTGTTTCCCGGCGAA
GATAAGCCTCTGCTGGTCTGGGGGAATACCCTCCTTATCCTGAATCTTGGCTTTCACATTATCAATGGTATCTGAACTCTCGACCTCAAGGGTAATGGTC
TTCCCAGTCAAAGTCTTGACAAAGATTTGCATGCCACCCCTCAAACGAAGCACCAAGTGGAGCGTGGACTCCTTCTGAATATTGTAATCGGCAAGGGTCC
TTCCATCCTCCAGTTGTTTACCAGCAAAAATAAGCCTCTGCTGATCCGGAGGGATGCCCTCTTTGTCTTGGATCTTGGCCTTGACATTATCAATGGTATC
TGAAC