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Detailed information on CNT30629098


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SJ22|CESA9_ARATH, E-value = 5e-40

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30532104Vigna unguiculataEucalyptus grandis19.8420.4384.2176reverse complement
CNT30493203Vigna unguiculataOlea europaea35.7735.2282.48137forward
CNT30287901Vigna unguiculataTriticum aestivum31.8546.0481.15122forward
CNT30313869Vigna unguiculataCamelina sativa30.2914.1685.34116forward
CNT30706792Vigna unguiculataPrunus avium21.676.6585.5483forward
CNT3028112Vigna unguiculataTheobroma cacao44.3946.4586.47170forward
CNT30100005Vigna unguiculataOryza rufipogon14.8824.4687.7257forward
CNT30112309Vigna unguiculataFicus carica35.7744.0585.4137forward

Expression of CNT30629098

Peptides detected in this lncRNA

>peptide 1 (61 aa)
FFFIHDSSQFNPQISNTGPSLETKGLILTHIRVKMEARRIDQTKMMVGILSCFPSNPLRKG*

Sequence

>CNT30629098
CCTTTTTCTTTATTCACGACTCATCACAATTCAATCCACAAATCTCTAACACAGGACCATCCCTTGAAACAAAGGGGTTAATTCTGACCCACATAAGAGT
CAAGATGGAGGCAAGAAGGATCGACCAGACCAAGATGATGGTTGGCATTCTGTCTTGTTTCCCAAGCAACCCCTTGAGGAAGGGGTAGAGATGGATGATG
ACCCACAGGGCAAAGAACAATCTTCCAAACAGAGGTCACCGTGAAGTTCGTGTTCACACCGGCCAACACCTTCAGTAAACCCTGAAATAGAGCAAAAAGA
TGGGAGGAGACGCCTCCGATCACCCAGAACTGTTCGTTCCTCCACCAGTCGTCGATGGAGACACCACCCCATTGCATCTCCAG