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Detailed information on CNT30629094


BLAST search results

BLAST vs Swiss-Prot:
sp|Q39176|ERLI1_ARATH, E-value = 3e-25

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30712006Vigna unguiculataGlycine max35.8667.5186.96322forward
CNT30174385Vigna unguiculataVigna angularis61.4765.6486.78552forward

Expression of CNT30629094

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MWYQNQNHLSHLNHQIHRSHLNLRNRLSHRNLLSHLNHLNHRNHLKDLV*

>peptide 2 (41 aa)
MLWPWVRAGACPTSRDKGKEEDVECEEKSKGRGSFGSHVKV*

>peptide 3 (39 aa)
MGRLRLIPRMFALRAVQRHTAASRSTRPFRRVQHGVTGG*

Sequence

>CNT30629094
AAAAGGCAGAAACCAATTTAGAAAAGATTATTGTAATATAATCATGGCTGAAACAAGTAAGTAATTAACATGATGTTTGGTTCCCAGGCTACGATTTACA
GAAATAATAGCATGAGGAACTTTACACTTATTGCAACAACACTCTAACCATGCAACTGAAGGGAATAATAAGGAGGATCGAGAAGTTAACCCTCATGCAC
GTACAATGAATTAGAACACACACAGAGGAAAAAGGAAATCCAGACGTAAAAGTAGGTAAAGATGATATGATTAAGCACACTGGAAATCATGTGGGACTTG
TTTGGAGCAAACATTGAGAAGCAAGGAGAGTGAGATGGGAAGGTTGAGGTTGATACCCAGAATGTTTGCTTTAAGGGCGGTGCAGAGACACACCGCAGCC
TCAAGATCAACCAGACCATTCAGGAGGGTGCAGCATGGGGTAACTGGTGGTTGACCCAAGGTGACGTTCACCAACCCATTTAGCACATTGGCACACACTC
CTAGTTTAAGTGCATCACGGGGGCATGTGGTACCAGAACCAGAACCACCTGAGCCACCTGAACCACCAGATCCACCGGAGCCACCTGAACCTCCGGAACC
GCCTGAGCCACCGGAACCTCCTGAGCCACCTGAACCACCTGAACCACCGGAACCACCTGAAGGACTTGGTTTGACAGGCTTATGCTTTGGCCTTGGGTGC
GGGCCGGGGCATGTCCCACAAGCAGAGACAAGGGCAAAGAAGAGGATGTTGAATGTGAAGAAAAGAGCAAGGGAAGAGGTAGTTTTGGAAGCCATGTTAA
AGTCTAGTAGTTGCTGAAACACTACTTGGCTACAAAAGAGAAGAGTGTTTGTGGGGATGTGAGTTATTGGCAGTGAATGGTGGTTTATATAGCGTTTT