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Detailed information on CNT30629075


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 3e-169

BLAST vs NONCODE:
NONMTRT001024, E-value = 1e-113

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30495036Vigna unguiculataOlea europaea68.4360.3482.05674forward
CNT30711048Vigna unguiculataGlycine max28.2249.8291.73278forward

Expression of CNT30629075

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MVSELSTSKVMVFPVNVFTKICIPPRSLKTKCRVDSFWML*

>peptide 2 (30 aa)
MVFPVRVFTNICIPPRSLNTRCRVDSFWML*

>peptide 3 (30 aa)
MVFPVNVFTKICIPPRSLKTRCRVDSFWIL*

Sequence

>CNT30629075
CGAGAAAGATATTTTTTATTTGATTTAAAGAACACACGAGTTCAGGGGATCATTTTGAAAACATAACAGCAGTACATACATACACAATCTGGTGATCAAG
AGTACAAGGAAACAACAGTTGGTGAAAAGTGAAAAAGTTAGAAGCCACCGCGAAGGCGAAGGACAAGGTGGAGGGTGGATTCCTTCTGAATGTTGTAGTC
TGCCAAGGTGCGACCATCTTCCAATTGTTTCCCAGCAAAAATAAGCCTCTGCTGATCTGGTAATGGTCTTTCCTGTCAGAGTCTTCACAAATATCTGCAT
TCCACCACGAAGCCTCAACACCAGGTGCAGAGTAGATTCCTTCTGGATGTTATAATCAGCAAGGGTTCGCCCATCTTCCAGCTGCTTCCCAGCAAAGATA
AGCCTTTGCTGGTCTGGTGGAATACCCTCTTTGTCCTGGATCTTTGCCTTTACATTATCAATGGTATCAGAACTTTCAACCTCCAAAGTAATGGTCTTTC
CTGTCAACGTCTTTACAAAAATTTGCATTCCACCACGAAGCCTCAAAACCAAGTGCAGGGTAGATTCTTTCTGGATGTTGTAATCCGCAAGGGTCCTTCC
ATCTTCAAGCTGTTTCCCGGCAAAGATAAGCCTCTGCTGATCTGGGGGGATACCCTCCTTATCCTGAATCTTTGCTTTCACATTGTCAATTGTATCTGAA
CTCTCCACTTCCAAAGTTATGGTCTTTCCTGTCAACGTCTTTACAAAAATTTGCATTCCACCACGAAGCCTCAAAACCAGGTGCAGGGTAGATTCCTTCT
GGATATTATAATCCGCAAGAGTTCTTCCATCTTCAAGCTGTTTCCCGGCGAAGATAAGCCTCTGCTGGTCTGGGGGAATACCCTCCTTATCCTGAATCTT
GGCTTTCACATTATCAATGGTATCTGAACTCTCGACCTCAAGGGTAATGGTCTTCCCAGTCAAAGTCTTGACAAAGATTTGCATG