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Detailed information on CNT30629041


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9ZSP6|AIR1L_ARATH, E-value = 2e-18

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30145276Vigna unguiculataMedicago truncatula20.7112.5583.8793forward

Expression of CNT30629041

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MWYQNQNHLSHLNHQIHRSHLNLRNRLSHRNLLSHLNHLNHRNHLKDLV*

>peptide 2 (52 aa)
ESEMARLRSKESEMGRLRLIPRMFALRAVQRHTAASRSTRPFRRVQHGVTGG*

Sequence

>CNT30629041
GGGAGAGTGAGATGGCAAGGTTGAGAAGCAAGGAGAGTGAGATGGGAAGGTTGAGGTTGATACCCAGAATGTTTGCTTTAAGGGCGGTGCAGAGACACAC
CGCAGCCTCAAGATCAACCAGACCATTCAGGAGGGTGCAGCATGGGGTAACTGGTGGTTGACCCAAGGTGACGTTCACCAACCCATTTAGCACATTGGCA
CACACTCCTAGTTTAAGTGCATCACGGGGGCATGTGGTACCAGAACCAGAACCACCTGAGCCACCTGAACCACCAGATCCACCGGAGCCACCTGAACCTC
CGGAACCGCCTGAGCCACCGGAACCTCCTGAGCCACCTGAACCACCTGAACCACCGGAACCACCTGAAGGACTTGGTTTGACAGGCTTATGCTTTGGCCT
TGGGTGCGGGCCGGGGCATGTCCCACAAGCAGAGACAAGGGCAAAGAAG