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Detailed information on CNT30629037


BLAST search results

BLAST vs Swiss-Prot:
sp|Q20F20|PSBH_OLTVI, E-value = 8e-09

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30730483Vigna unguiculataCorchorus capsularis22.8227.8991.06123forward
CNT30401838Vigna unguiculataBeta vulgaris22.8232.0387.8123forward
CNT3045662Vigna unguiculataPrunus dulcis28.5712.6486.36154reverse complement
CNT3090241Vigna unguiculataSolanum tuberosum26.7210.9388.19144forward
CNT30511491Vigna unguiculataSolanum lycopersicum26.7216.7888.19144reverse complement
CNT30231593Vigna unguiculataAnanas comosus33.422.8482.22180forward
CNT30574487Vigna unguiculataVitis vinifera22.8219.9491.06123forward

Expression of CNT30629037

Peptides detected in this lncRNA

>peptide 1 (42 aa)
KIQGKVCPLLKIKTNWRSLKESKFFNIFLELFEKVFKSSCEV*

>peptide 2 (32 aa)
KNSRKGLSFAQNKDKLEKLERIKIFQYIFRTL*

Sequence

>CNT30629037
AAAAATTCAAGGAAAGGTTTGTCCTTTGCTCAAAATAAAGACAAACTGGAGAAGCTTGAAAGAATCAAAATTTTTCAATATATTTTTAGAACTCTTTGAA
AAGGTTTTTAAATCCAGTTGCGAGGTCTAAATATTTAGTATGAATCATAGTATTAAGATTTTTAGAATCTATTTTCTATATTCCGTGCTCCAGATACTAG
ATTAAATATCTGACGGAATAAAACCATCTATATCAAGATGACAGACCCATTTTATGTTCTGTACTTTCAATAGGACCAATTAAACAAGTCACACACTCAT
ATTCCGGAAATACAGAAACAAAGAAATTCTACGATCAAACTACCACATCAACATGGAATAGACTAAGAAACAATAAGAAACCTAAACGCTTCACTTTCTA
TAAACTAATTACTCGATTCTTGTGAATCTAATTGATAGAAATTCCGTCCAATAAAATGGACGAATTATAAATCTCCAAAATAATAGATAGAAATATCGCA
AATAGAGCCATTGCAACACCCATCAAAGGAGTAGTTCCC