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Detailed information on CNT30629033


BLAST search results

BLAST vs Swiss-Prot:
sp|Q39817|CALX_SOYBN, E-value = 1e-84

BLAST vs NONCODE:
NONGMAT001818, E-value = 8e-123

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30517641Vigna unguiculataJuglans regia73.7984.7683.55456forward
CNT30561418Vigna unguiculataActinidia chinensis81.0749.780.24501forward

Expression of CNT30629033

Peptides detected in this lncRNA

>peptide 1 (74 aa)
WNPARPFDPASASSAFCFSFSTENLGFQVVSRYDSAILSSLAIKMLSNKMPSCIVQISIPIAAIGSKSGFLSSK*

>peptide 2 (60 aa)
MPFSLISRIPLHWPLPLTTAWGGFTFWVLNLWGFPFTILLIVPIFRFCGLWIIYLLRFII*

Sequence

>CNT30629033
CTGGAATCCAGCAAGACCATTTGATCCAGCTTCAGCTTCCTCTGCCTTCTGTTTCTCTTTTTCAACTGAAAACTTGGGTTTCCAAGTAGTCTCCCGATAC
GACTCAGCAATTTTATCATCTTTAGCTATCAAGATGTTGTCAAACAAAATGCCATCTTGCATTGTCCAAATCTCAATACCAATAGCTGCGATTGGCTCAA
AATCAGGTTTCTTAAGTTCAAAGTAAGCAGGGTTTGGAATATCCCTAGGTTTCCATATACCCTTATAAGCAGGATTTTCAATGAGTGGTGCATGCCATTT
TCCCTTATAAGCAGGATTCCTCTTCATTGGCCTCTTCCACTCACCACAGCCTGGGGCGGCTTCACATTTTGGGTTCTCAATCTTTGGGGCTTCCCATTCA
CCATCCTCCTCATCGTCCCAATCTTCCGGTTTTGTGGCCTCTGGATCATCTATCTCCTCCGGTTCATCATCTAACCATCCTTCAGGTTTTTCAGCTTCTT
CATCAACAATTTCCAAGGGGTGCATCCTCATCCCAGTCGTCTGGCTTTACCGCACTTGGGTCTGGAATTTTCTCTCTCTCATCCCAGTCCTCAGGCTTCT
TATCGTCAGCATCTGGGA