« Back to Vigna unguiculata search


Detailed information on CNT30629001


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG84|UBI4P_NICSY, E-value = 0.0

BLAST vs NONCODE:
NONMTRT001024, E-value = 4e-154

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30516063Vigna unguiculataJuglans regia74.5192.3182.46912forward
CNT30701438Vigna unguiculataQuercus lobata87.017382.441065forward
CNT30500417Vigna unguiculataCoffea canephora87.0152.8881.61065forward
CNT3069553Vigna unguiculataQuercus suber50.9886.3183.81624forward
CNT30525214Vigna unguiculataPhaseolus vulgaris84.1553.0791.071030forward
CNT3085996Vigna unguiculataVigna radiata97.1482.7488.141189forward
CNT3032754Vigna unguiculataTheobroma cacao84.7279.0482.641037forward
CNT3056329Vigna unguiculataAmborella trichopoda72.1476.4581.65883forward
CNT3024139Vigna unguiculataPopulus trichocarpa73.0483.2481.99894forward

Expression of CNT30629001

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MVSELSTSRVMVFPVKVLTKICMPPLKRSTKWSVDSF*

>peptide 2 (30 aa)
MVFPVRVFTNICIPPRSLNTRCRVDSFWML*

>peptide 3 (30 aa)
MVFPVNVFTKICIPPRSLKTRCRVDSFWIL*

>peptide 4 (40 aa)
MVSELSTSKVMVFPVNVFTKICIPPRSLKTKCRVDSFWML*

Sequence

>CNT30629001
AGCGATGATACTAGTCTTTCAATCTTTTGTTGAATTACAAACATATACTAGTCTTCGAACATAAGAAAAGCACCCAACCGAGAACTGCAGCACACGATTT
CAATTGACACTGGACACAATAGATAGCTGGACATAATAGACACGAAGCTTAGCTTAGAAACCACCGCGAAGGCGAAGGACAAGGTGCAGGGTAGATTCCT
TCTGAATATTGTAGTCTGCCAAGGTGCGACCATCTTCCAATTGTTTCCCAGCAAAAATAAGCCTCTGCTGATCTGGTGGAATGCCCTCCTTGTCTTGAAT
CTTTGCTTTCACATTATCAATTGTATCAGAGCTCTCCACCTCCAAGGTAATGGTCTTTCCTGTCAGAGTCTTCACAAATATCTGCATTCCACCACGAAGC
CTCAACACCAGGTGCAGAGTAGATTCCTTCTGGATGTTATAATCAGCAAGGGTTCGCCCATCTTCCAGCTGCTTCCCAGCAAAGATAAGCCTTTGCTGGT
CTGGTGGAATACCCTCTTTGTCCTGGATCTTTGCCTTTACATTATCAATGGTATCAGAACTTTCAACCTCCAAAGTAATGGTCTTTCCTGTCAACGTCTT
TACAAAAATTTGCATTCCACCACGAAGCCTCAAAACCAAGTGCAGGGTAGATTCTTTCTGGATGTTGTAATCCGCAAGGGTCCTTCCATCTTCAAGCTGT
TTCCCGGCAAAGATAAGCCTCTGCTGATCTGGGGGGATACCCTCCTTATCCTGAATCTTTGCTTTCACATTGTCAATTGTATCTGAACTCTCCACTTCCA
AAGTTATGGTCTTTCCTGTCAACGTCTTTACAAAAATTTGCATTCCACCACGAAGCCTCAAAACCAGGTGCAGGGTAGATTCCTTCTGGATATTATAATC
CGCAAGAGTTCTTCCATCTTCAAGCTGTTTCCCGGCGAAGATAAGCCTCTGCTGGTCTGGGGGAATACCCTCCTTATCCTGAATCTTGGCTTTCACATTA
TCAATGGTATCTGAACTCTCGACCTCAAGGGTAATGGTCTTCCCAGTCAAAGTCTTGACAAAGATTTGCATGCCACCCCTCAAACGAAGCACCAAGTGGA
GCGTGGACTCCTTCTGAATATTGTAATCGGCAAGGGTCCTTCCATCCTCCAGTTGTTTACCAGCAAAAATAAGCCTCTGCTGATCCGGAGGGATGCCCTC
TTTGTCTTGGATCTTGGCCTTGAC