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Detailed information on CNT30628962


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONGMAT001818, E-value = 1e-74

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3043981Vigna unguiculataPrunus dulcis35.0841.7682.31147forward
CNT30120413Vigna unguiculataCitrus clementina90.9347.183.73381forward

Expression of CNT30628962

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MPFSLISRIPLHWPLPLTTAWGGFTFWVLNLWGFPFTILLIVPIFRFC

>peptide 2 (68 aa)
FDPASASSAFCFSFSTENLGFQVVSRYDSAILSSLAIKMLSNKMPSCIVQISIPIAAIGSKSGFLSSK*

Sequence

>CNT30628962
ATTTGATCCAGCTTCAGCTTCCTCTGCCTTCTGTTTCTCTTTTTCAACTGAAAACTTGGGTTTCCAAGTAGTCTCCCGATACGACTCAGCAATTTTATCA
TCTTTAGCTATCAAGATGTTGTCAAACAAAATGCCATCTTGCATTGTCCAAATCTCAATACCAATAGCTGCGATTGGCTCAAAATCAGGTTTCTTAAGTT
CAAAGTAAGCAGGGGTTTGGAATATCCCTAGGTTTCCATATACCCTTATAAGCAGGATTTTCAATGAGTGGTGCATGCCATTTTCCCTTATAAGCAGGAT
TCCTCTTCATTGGCCTCTTCCACTCACCACAGCCTGGGGCGGCTTCACATTTTGGGTTCTCAATCTTTGGGGCTTCCCATTCACCATCCTCCTCATCGTC
CCAATCTTCCGGTTTTGTG