Detailed information on CNT30628930


BLAST search results

BLAST vs Swiss-Prot:
sp|P49440|CHSY_PHAVU, E-value = 0.0

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30143557Vigna unguiculataMedicago truncatula76.0985.3984.12894forward
CNT30151821Vigna unguiculataPrunus persica31.5764.4181.13371forward
CNT30114121Vigna unguiculataFicus carica35.8326.0581.71421forward

Expression of CNT30628930

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MAPSLSGAMVCAVQTSSNNGFSICGIGSEPTMTAAAPSPNSACPTRLSR*

>peptide 2 (51 aa)
MSTPLVVQKIKCVIFDFGCPHSFMAFTAASFPNFGTSTTTMSCLASKEGAM*

>peptide 3 (53 aa)
MLYCDTVKNNRLNGKSRSKTKQYSPFKSFTCGFESIFSGFLPHLIQDKKHTCT*

>peptide 4 (35 aa)
MYYFDVKYNLRKLIHNNNNNNNKIIELGQCYIVTL*

>peptide 5 (45 aa)
MVSPGPKPNNTPHSSPSLVVLNPFSADFFLISSKIKSTHALDMFP*

Sequence

>CNT30628930
TTCTATAACTATTCATTCTTAATAAAAGTTATTTAAATATTATAAGTCAAGAAAAAAATAATAATCACAATGTATCATAAGTTATTAATTAGTCTCAAAA
GCCCCGAACCATGTATTACTTTGATGTAAAATACAACCTTCGAAAATTAATACATAATAATAATAATAACAACAATAAAATAATAGAGTTGGGACAATGT
TATATTGTGACACTGTGAAGAACAACCGTCTCAATGGTAAGTCCAGGTCCAAAACCAAACAATACTCCCCATTCAAGTCCTTCACTTGTGGTTTTGAATC
CATTTTCAGCGGATTTCTTCCTCATCTCATCCAAGATAAAAAGCACACATGCACTTGACATGTTCCCGTAGTCACTAAGCACATCTCTAGTGGCCTTCAT
CTTTTCAGGTTTGAGACCCAACTTTTGCTCAACTTGGTCAAGAATTGTAGGGCCACCAGGATGTGCAATCCAAAAGATGGAGTTGTAATCAGAGATGTTC
AATGGATCAAAGGCCTCGGAAAGTGCCTTTCCAATGTTCTTTGAGACAATCCCAGGAACATCCTTAAGAAGGTGAAAGGTGAGTCCAACTTCTCGAAGGT
GGCCATCAATGGCACCTTCACTATCTGGAGCAATGGTCTGTGCAGTCCAAACAAGCTCAAACAATGGCTTCTCAATCTGTGGAATTGGGTCAGAACCAAC
AATGACTGCAGCTGCTCCATCGCCAAATAGTGCCTGTCCCACAAGACTGTCTAGGTGAGTTTCACTTGGGCCACGGAAGGTGACTGCAGTGATCTCAGAA
CACACGACAAGCACACGGGCTCCCTTATTGTTCTCAGCTAAATCCTTGGCCAATCGAAGAACCGTGCCTCCTGCAAAGCACCCTTGTTGGTACATCATGT
ACCTCTTGACATAGGGGCGAAGTCCGAGGAGTTTGGTGAGCTGGTAATCAGCACCAGGCATGTCGACGCCACTGGTGGTGCAAAAGATCAAGTGTGTAAT
CTTTGACTTTGGTTGTCCCCATTCCTTTATGGCCTTCACTGCAGCATCTTTCCCTAACTTTGGTACCTCTACCACTACTATGTCTTGCCTCGCATCCAAA
GAAGGTGCCATGTAAGCACACATGTTGGGATTCTCCTTCAGGACCTCCTCTGTCACGTGCATGTATCTCTTCTTG