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Detailed information on CNT30628928


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONGMAT000067, E-value = 5e-111

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30727660Vigna unguiculataCorchorus capsularis81.5674.4179.85407forward
CNT30379051Vigna unguiculataManihot esculenta75.3553.8780.85376forward
CNT30524932Vigna unguiculataPhaseolus vulgaris83.7789.1394.5418forward
CNT3091613Vigna unguiculataSolanum tuberosum69.1445.6382.03345forward
CNT30216750Vigna unguiculataKalanchoe fedtschenkoi52.153.0681.54260forward
CNT30350932Vigna unguiculataEragrostis tef60.3267.3481.73301forward
CNT30573937Vigna unguiculataVitis vinifera32.0624.6285160forward
CNT30642003Vigna unguiculataCannabis sativa66.1348.3979.7330forward
CNT3051546Vigna unguiculataAmborella trichopoda44.8946.4781.7224forward
CNT3023318Vigna unguiculataPopulus trichocarpa57.5244.8480.14287forward
CNT30330867Vigna unguiculataDioscorea rotundata69.7448.1379.02348forward
CNT30150463Vigna unguiculataBrachypodium distachyon58.5233.2279.79292forward

Expression of CNT30628928

Peptides detected in this lncRNA

>peptide 1 (32 aa)
FGDVGLYGLDGDNLGLLGEYANEGLYFADWGL*

>peptide 2 (36 aa)
LGMWDYMDLMETILDCLENMPMKDCTLLTGDCNLGK*

>peptide 3 (62 aa)
MQVKWGYRQVKWDCMQVKSGCSWEKLGYNWVMWGCSWAMMDYSLEMMDCTREMRWEKMPSHQH

Sequence

>CNT30628928
GTTTGGGGATGTGGGACTATATGGACTTGATGGAGACAATCTTGGACTGCTTGGAGAATATGCCAATGAAGGACTGTACTTTGCTGACTGGGGATTGTAA
CTTGGGGAAGTAGGACTATACGATGGGGATGTTGGGCTATATGAGGGTGACGTAGGGCTGTATCCAGGTGAAGTGGGGCTGTAAGCAGGGGATGCAGGGC
TATATGATGGGGAGGTAGGGCTGTAAGAGGGTGAAGTGGGGCTGTATGAAGGTGAGGTAGGACTATATGAAGGTGACGTAGGGCTGTAGGAAGGTGAAGT
GGGACTATATGCAGGTGAAGTGGGGCTATAGGCAGGTGAAGTGGGACTGTATGCAGGTGAAGTCGGGCTGTAGCTGGGAGAAGTTGGGCTATAACTGGGT
GATGTGGGGCTGTAGCTGGGCGATGATGGACTATAGCCTGGAGATGATGGACTGTACCCGGGAGATGAGGTGGGAGAAAATGCCATCCCACCAACATAA