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Detailed information on CNT30628922


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONGMAT000067, E-value = 2e-41

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3087924Vigna unguiculataVigna radiata105.1886.8488.64264forward
CNT30114394Vigna unguiculataFicus carica39.0416.4784.6998forward

Expression of CNT30628922

Peptides detected in this lncRNA

>peptide 1 (30 aa)
DVGLYGLDGDNLGLLGEYANEGLYFADWGL*

>peptide 2 (35 aa)
GMWDYMDLMETILDCLENMPMKDCTLLTGDCNLGK*

Sequence

>CNT30628922
GGGATGTGGGACTATATGGACTTGATGGAGACAATCTTGGACTGCTTGGAGAATATGCCAATGAAGGACTGTACTTTGCTGACTGGGGATTGTAACTTGG
GGAAGTAGGACTATACGATGGGGATGTTGGGCTATATGAGGGTGACGTAGGGCTGTAGGAAGGTGAAGTGGGACTATATGCAGGTGAAGTGGGGCTATAG
GCAGGTGAAGTGGGACTGTATGCAGGTGAAGTCGGGCTGTAGCTGGGAGAA