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Detailed information on CNT30628885


BLAST search results

BLAST vs Swiss-Prot:
sp|P27774|KPPR_MESCR, E-value = 1e-80

BLAST vs NONCODE:
NONMTRT001255, E-value = 2e-51

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691096Vigna unguiculataOryza sativa75.1232.6482.48314forward
CNT30670719Vigna unguiculataSetaria viridis53.5948.5982.14224forward
CNT30513083Vigna unguiculataJuglans regia68.4265.1584.97286forward
CNT30373358Vigna unguiculataArabidopsis thaliana57.8947.7380.58242forward
CNT30708150Vigna unguiculataGlycine max76.0858.6792.14318forward
CNT30565281Vigna unguiculataActinidia chinensis60.7754.2782.68254forward
CNT3087966Vigna unguiculataVigna radiata91.6370.1596.34383forward
CNT30552726Vigna unguiculataOryza glaberrima75.1263.1882.8314forward
CNT30145996Vigna unguiculataMedicago truncatula82.0683.8685.71343forward
CNT30608349Vigna unguiculataGossypium raimondii39.953380.24167forward
CNT30686133Vigna unguiculataTriticum urartu29.6749.683.06124forward
CNT30595648Vigna unguiculataOryza meridionalis64.1144.383.58268forward
CNT30369615Vigna unguiculataOryza glumipatula44.7433.8282.89187forward
CNT30644238Vigna unguiculataCannabis sativa51.6781.282.41216forward
CNT30575421Vigna unguiculataOryza barthii75.1243.7382.8314forward
CNT30116076Vigna unguiculataOryza nivara81.3447.3582.65340forward
CNT30114771Vigna unguiculataEutrema salsugineum37.0840.5881.29155forward

Expression of CNT30628885

Peptides detected in this lncRNA

>peptide 1 (91 aa)
MVVDWFLNSNSIFDCFNLFIHEIKIIGSRVKSSDTLLLSASSIQRVVIIQAYNSGGVTDESVGIRVATLWRFCSSSKHTGEPPHEGTFSTT*

>peptide 2 (53 aa)
MRVLESGLPPFGGSAAPPNTLVSLLMKVLFPQPESAARPITTVCWSLAAHVIT*

Sequence

>CNT30628885
TTCCAAGCGAATTTCACCTCATTGCTAATGTCTAGGTAGATGCTAAAGTCCAAGAGACCAGTGACATGGTTGTAGATTGGTTTTTGAACAGCAATTCCAT
CTTTGATTGCTTTAACTTGTTCATACATGAGATCAAAATCATTGGCTCTAGGGTCAAGAGCAGTGACACCCTTCTCCTTTCTGCCAGTTCTATCCAAAGA
GTGGTAATCATCCAAGCATATAACAGTGGTGGTGTCACTGATGAGAGTGTTGGAATCAGGGTTGCCACCCTTTGGAGGTTCTGCAGCTCCTCCAAACACA
CTGGTGAGCCTCCTCATGAAGGTACTTTTTCCACAACCTGAATCAGCAGCAAGACCAATCACCACTGTCTGTTGGTCACTGGCTGCACATGTTATCACAT
AGCTTCTGCCACTGTTGC