« Back to Vigna unguiculata search


Detailed information on CNT30628877


BLAST search results

BLAST vs Swiss-Prot:
sp|P49440|CHSY_PHAVU, E-value = 0.0

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30524897Vigna unguiculataPhaseolus vulgaris66.4598.3794.21604forward

Expression of CNT30628877

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MAPSLSGAMVCAVQTSSNNGFSICGIGSEPTMTAAAPSPNSA*

>peptide 2 (45 aa)
MVSPGPKPNKTPHSSPSPVDLSPFSTDFLLISSNMKSTHALDMFP*

>peptide 3 (39 aa)
MMLYCNAVKNNGFDGKSRSKTKQDTPFKSFTCGFESILY*

Sequence

>CNT30628877
TATTGATCTGATAAAAAAAATAGAATTATTGATATGATAAAAAAATTAAAAGTAAAATCTCATACAAGTAAAGTATACGAGAAAGTAATAGATCTGGGAT
GATGTTATATTGCAATGCTGTGAAGAACAACGGTTTCGATGGTAAGTCCAGGTCCAAAACCAAACAAGACACCCCATTCAAGTCCTTCACCTGTGGATTT
GAGTCCATTCTCTACTGATTTCCTCCTCATCTCATCCAATATGAAAAGCACACATGCACTTGACATGTTTCCATAGTCACTAAGCACATCTCTAGTGGCC
TTCATCTTTTCAGGTTTGAGACCCAACTTTTGCTCAACTTGATCAAGAATTGCAGGTCCACCAGGGTGTGCAATCCAGAAGATGGAGTTGTAATCAGAGA
TGTTCAATGGATCGAAGGCCTCGGAAAGTGCCTTCCCAATGTTCTTTGAGACAATCCCAGGAACATCCTTAAGGAGGTGAAAAGTGAGTCCAACTTCACG
AAGGTGGCCATCAATGGCACCTTCACTGTCTGGAGCAATGGTCTGTGCAGTCCAAACAAGCTCAAACAATGGCTTCTCAATTTGTGGAATTGGGTCAGAA
CCAACAATGACTGCAGCTGCTCCATCTCCAAACAGTGCTTGACCCACAAGACTGTCTAGGTGAGTTTCACTTGGGCCACGGAAGGTGACTGCAGTGATCT
CAGAACACACGACAAGCACACGGGCTCCCTTATTGTTCTCAGCTAAATCCTTGGCCAATCGAAGAACCGTGCCTCCTGCAAAGCACCCTTGTTGGTACAT
CATGTACCTCTTGACATAGGGGCGAAGTCCGAGGAGTTTGGTGAGCTGGTAATCAGCACCAGGCATGTCGACGCCACTGGTGGTGCAAAAGATCAAGTGT
GTAATCTTT