« Back to Vigna unguiculata search


Detailed information on CNT30628831


BLAST search results

BLAST vs Swiss-Prot:
sp|P09756|CB23_SOYBN, E-value = 9e-83

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30514020Vigna unguiculataJuglans regia32.9126.3388.84233forward
CNT30200456Vigna unguiculataPisum sativum35.5963.4885.71252forward
CNT30725300Vigna unguiculataLupinus angustifolius86.5863.281.4613forward

Expression of CNT30628831

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MGRSFHLGKLGQSPHREAQIARMLCAWTRFGLPK*

>peptide 2 (29 aa)
MAHLEWMTSSSRFLAKVSGSAESPAVSQP*

>peptide 3 (35 aa)
MENMANLPFFSSFTFNSAKASGSSARPNGSKLPPG*

Sequence

>CNT30628831
TTTTGCATCCAATATATATTTCATTGCATAAAAACTTGAAAGTCACACTCCAGTGGTAGTTTCTCACTGTTTTAATTTAATTTAATTTATTTTTTCTCAC
TTTCCAGGGACAAAGTTTGTAGCATATGCCCAAGCATTGTTGTTGACTGGGTCAGCAAGGTGGTCGGCGAGGTTTTCCAGGGGTCCCTTTCCGGTAACAA
TCGCTTGAACAAAGAAACCGAACATGGAGAACATGGCTAATCTACCGTTTTTCAGTTCTTTCACCTTCAACTCAGCGAAAGCCTCTGGGTCATCAGCAAG
GCCCAATGGGTCGAAGCTTCCACCTGGGTAAATTGGGTCAGTCACCTCACCGAGAGGCCCAGATAGCAAGGATGCTCTGTGCGTGGACCAGGTTTGGATT
GCCCAAGTAGTCAAGCCCACCCTCACTGAATATCTGAGAGCCAGCCTTAAACCACACAGCCTCGCCGAACTTGACACCATTACGGGACAAGAGTTCGGGG
AAAACACAGCCCAAGGCTCCCAACATGGCCCATCTGGAGTGGATGACTTCAAGTTCACGGTTTTTGGCAAAAGTCTCTGGGTCAGCGGAGAGCCCAGCAG
TATCCCAGCCATAGTCACCTGGGAATTCACCGGTGAGGTACGATGGTGCCTCACCAGAGAATGGGCCCAAGTACTTAACACGGTCCGGGCCGTACCATGG
GCTTCCAG