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Detailed information on CNT30628733


BLAST search results

BLAST vs Swiss-Prot:
sp|P49440|CHSY_PHAVU, E-value = 0.0

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30195656Vigna unguiculataPisum sativum55.4565.4684.79743forward
CNT3087878Vigna unguiculataVigna radiata95.7582.0992.831283forward

Expression of CNT30628733

Peptides detected in this lncRNA

>peptide 1 (40 aa)
GMMLYCNAVKNNGFDGKSRSKTKQDTPFKSFTCGFESILY*

>peptide 2 (42 aa)
MAPSLSGAMVCAVQTSSNNGFSICGIGSEPTMTAAAPSPNSA*

>peptide 3 (45 aa)
MVSPGPKPNKTPHSSPSPVDLSPFSTDFLLISSNMKSTHALDMFP*

>peptide 4 (51 aa)
MSTPLVVQKIKCVIFDFGCPHSFMAFTAASFPNFGTSTTTMSCLASKEGAM*

Sequence

>CNT30628733
CTGGGATGATGTTATATTGCAATGCTGTGAAGAACAACGGTTTCGATGGTAAGTCCAGGTCCAAAACCAAACAAGACACCCCATTCAAGTCCTTCACCTG
TGGATTTGAGTCCATTCTCTACTGATTTCCTCCTCATCTCATCCAATATGAAAAGCACACATGCACTTGACATGTTTCCATAGTCACTAAGCACATCTCT
AGTGGCCTTCATCTTTTCAGGTTTGAGACCCAACTTTTGCTCAACTTGGTCAAGAATTGCAGGCCCGCCAGGGTGTGCAATCCAAAAGATGGAGTTGTAA
TCAGAGATGTTCAATGGATCGAAGGCCTCAGAAAGTGCCTTCCCAATGTTCTTTGAAACAATCCCAGGAACATCCTTAAGGAGGTGAAAAGTGAGTCCAA
CTTCACGAAGGTGGCCATCAATGGCACCTTCACTGTCTGGAGCAATGGTCTGTGCAGTCCAAACAAGCTCAAACAATGGCTTCTCAATTTGTGGAATTGG
GTCAGAACCAACAATGACTGCAGCTGCTCCATCTCCAAACAGTGCTTGACCCACAAGACTGTCTAGGTGAGTTTCACTTGGGCCACGGAAGGTGACTGCA
GTGATCTCAGAACACACGACAAGCACACGGGCTCCCTTATTGTTCTCAGCTAAATCCTTGGCCAATCGAAGAACCGTGCCTCCTGCAAAGCACCCTTGTT
GGTACATCATGTACCTCTTGACATAGGGGCGAAGTCCGAGGAGTTTGGTGAGCTGGTAATCAGCACCAGGCATGTCGACGCCACTGGTGGTGCAAAAGAT
CAAGTGTGTAATCTTTGACTTTGGTTGTCCCCATTCCTTTATGGCCTTCACTGCAGCATCTTTCCCTAACTTTGGTACCTCTACCACTACTATGTCTTGC
CTCGCATCCAAAGAAGGTGCCATGTAAGCACACATGTTGGGATTCTCCTTCAGGACCTCCTCTGTCACGTGCATGTATCTCTTCTTGATCATCGACTTGT
CGCCTGGAACATCATAAACCAAATATTAGCTTGATTCAACAATAGACATTATGAAACATCATGTGAAAGTGAAAAGAGTATACATATATTGATTCAAGAA
CTTACACATGCGTTGGAACTTCTCCTTGAGATCGGTCATGTGCTCACTATTTGTAATTCTAAAGTAATAGTCGGGATAGGTGCTCTGATCAACACAGTTC
GGTGGAGTAGCAGTTCCAATTGCAAGGATGGTTGCAGGCCCCTCTGCCCTTTGAGCTTGACGGATCTCCGACACACTCACCATCTTCCTTTCCTTTGATA
TATGGAACTAACAATAGAAGTGGCAGATGATGTTGCTGAT