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Detailed information on CNT30628726


BLAST search results

BLAST vs Swiss-Prot:
sp|P49440|CHSY_PHAVU, E-value = 0.0

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30195771Vigna unguiculataPisum sativum82.4260.3782.54905forward
CNT30564018Vigna unguiculataActinidia chinensis25.9640.1481.05285forward
CNT30597791Vigna unguiculataFraxinus excelsior6.1922.7485.2968forward
CNT30355633Vigna unguiculataLactuca sativa19.4939.1982.71214forward
CNT30644974Vigna unguiculataCannabis sativa39.0753.4279.95429forward
CNT3022855Vigna unguiculataPopulus trichocarpa52.6483.4178.37578forward

Expression of CNT30628726

Peptides detected in this lncRNA

>peptide 1 (93 aa)
MAPSLSGAMVCAVQTSSNNGFSICGIGSEPTITAAAPSPNSACPTRLSRWVSLGPRKVTAVISEHTTSTRAPLLFSAKSLANRRTVPPAKHPC*

>peptide 2 (36 aa)
TMYYFDVKYNLRKLIHNNNNNNNKIIELGQCYIVTL*

>peptide 3 (45 aa)
MVSPGPKPNNTPHSSPSLVVLNPFSADFFLISSKIKSTHALDMFP*

>peptide 4 (51 aa)
MSTPLVVQKIKCVIFDFGCPHSFMAFTAASFPNFGTSTTTMSCLASKEGAM*

>peptide 5 (53 aa)
MLYCDTVKNNRLNGKSRSKTKQYSPFKSFTCGFESIFSGFLPHLIQDKKHTCT*

Sequence

>CNT30628726
AACCATGTATTACTTTGATGTAAAATACAACCTTCGAAAATTAATACATAATAATAATAATAACAACAATAAAATAATAGAGTTGGGACAATGTTATATT
GTGACACTGTGAAGAACAACCGTCTCAATGGTAAGTCCAGGTCCAAAACCAAACAATACTCCCCATTCAAGTCCTTCACTTGTGGTTTTGAATCCATTTT
CAGCGGATTTCTTCCTCATCTCATCCAAGATAAAAAGCACACATGCACTTGACATGTTCCCGTAGTCACTAAGCACATCTCTAGTGGCCTTCATCTTTTC
AGGTTTGAGACCCAACTTTTGCTCAACTTGGTCAAGAATTGCAGGCCCACCAGGGTGTGCAATCCAGAAGATGGAGTTGTAATCAGAGATGTTCAGTGGA
TCGAAGGCTTCAGAAAGTGCCTTCCCAATGTTCTTTGAAACAATCCCAGGAACATCTTTAAGGAGGTGAAAGGTAAGTCCAACTTCACGAAGGTGACCAT
CAATGGCACCATCACTGTCCGGTGCAATGGTCTGTGCAGTCCAAACAAGCTCAAACAATGGCTTCTCAATCTGTGGAATTGGGTCAGAACCAACAATAAC
TGCAGCTGCTCCATCGCCAAACAGTGCTTGTCCCACAAGACTATCTAGGTGGGTGTCACTTGGGCCACGAAAGGTGACTGCAGTGATCTCAGAACACACG
ACAAGCACACGAGCACCCTTGTTGTTCTCAGCCAAATCCTTGGCCAATCGAAGAACCGTGCCTCCTGCAAAACACCCCTGTTGATACATCATGTACCTCT
TGACATAGGGGCGAAGTCCGAGAAGTTTAGTGAGCTGGTAATCAGCACCAGGCATGTCGACACCACTGGTGGTGCAAAAGATCAAGTGTGTAATCTTTGA
TTTCGGTTGCCCCCACTCTTTTATGGCCTTCACTGCAGCCTCTTTCCCTAACTTTGGTACCTCTACCACAACTATGTCTTGCCTCGCATCCAAAGAAGGT
GCCATGTAAGCACACATGTTGGGATTCTCCTTCAGGACCTCCTCTGTCACGTGCATGTATCTCTTCTTGATCATCGACTTGTCGCCTGGAACATCATA