« Back to Vigna unguiculata search


Detailed information on CNT30628702


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONGMAT000067, E-value = 2e-142

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30315993Vigna unguiculataCorylus avellana84.9658.0379.21582forward
CNT30549101Vigna unguiculataIpomoea triloba57.2366.4478.57392forward
CNT30516897Vigna unguiculataJuglans regia87.8868.179.9602forward
CNT30376379Vigna unguiculataArabidopsis thaliana68.1862.7779.66467forward
CNT30500730Vigna unguiculataCoffea canephora57.2345.3780.36392forward
CNT30616460Vigna unguiculataSesamum indicum71.0933.9478.23487forward
CNT30267761Vigna unguiculataChenopodium quinoa67.8856.9979.14465forward
CNT3021333Vigna unguiculataCitrullus lanatus58.9868.2479.46404forward
CNT30727661Vigna unguiculataCorchorus capsularis62.6368.5379.49429forward
CNT30195835Vigna unguiculataPisum sativum27.4574.0286.7188forward
CNT30489068Vigna unguiculataOlea europaea56.6478.5478.35388forward
CNT30506120Vigna unguiculataNicotiana attenuata58.5468.5581.3401forward
CNT3042412Vigna unguiculataPrunus dulcis86.7280.1681.48594forward
CNT3091701Vigna unguiculataSolanum tuberosum85.476.9780.68585forward
CNT30304911Vigna unguiculataTriticum aestivum24.2327.7683.13166forward
CNT30591949Vigna unguiculataMusa acuminata58.5482.5178.8401forward
CNT30234460Vigna unguiculataBrassica oleracea61.1759.680.43419forward
CNT30508722Vigna unguiculataSolanum lycopersicum74.0198.8380.47507forward
CNT3076593Vigna unguiculataBrassica juncea67.7484.9879.53464forward
CNT30263540Vigna unguiculataBrassica rapa6063.7280.05411forward
CNT3017802Vigna unguiculataZea mays41.4673.0184.15284forward
CNT30216752Vigna unguiculataKalanchoe fedtschenkoi19.5628.9484.33134forward
CNT30688491Vigna unguiculataTriticum urartu41.4666.3680.99284forward
CNT30341749Vigna unguiculataEragrostis tef37.9658.4381.15260forward
CNT30366570Vigna unguiculataSorghum bicolor36.6441.0182.87251forward
CNT30354661Vigna unguiculataLactuca sativa26.1332.1983.8179forward
CNT30408809Vigna unguiculataPapaver somniferum58.6946.5379.6402forward
CNT30573870Vigna unguiculataVitis vinifera67.7465.8281.25464forward
CNT30705868Vigna unguiculataPrunus avium85.8455.3780.78588forward
CNT30642027Vigna unguiculataCannabis sativa62.0466.6179.29425forward
CNT3035160Vigna unguiculataCucumis melo34.1646.4381.62234forward
CNT30176441Vigna unguiculataVigna angularis88.3210094.55605forward
CNT3049544Vigna unguiculataCucumis sativus68.1858.381.37467forward

Expression of CNT30628702

Peptides detected in this lncRNA

>peptide 1 (38 aa)
CSLGMWDYMDLMETILDCLENMPMKDCTLLTGDCNLGK*

>peptide 2 (36 aa)
MWGCTQAMMDYSLEMMDCTREMRWEKMPSHQHKVKTG

Sequence

>CNT30628702
CTGTAGTTTGGGGATGTGGGACTATATGGACTTGATGGAGACAATCTTGGACTGCTTGGAGAATATGCCAATGAAGGACTGTACTTTGCTGACTGGGGAT
TGTAACTTGGGGAAGTAGGACTATACGATGGGGATGTTGGGCTATATGAGGGTGACGTAGGGCTGTATCCAGGTGAAGTGGGGCTGTAAGCAGGGGATGC
AGGGCTATATGATGGGGAGGTAGGGCTGTAAGAGGGTGAAGTGGGGCTGTATGAAGGTGAGGTAGGACTATATGAAGGTGACGTAGGGCTGTAGGAAGGT
GAAGTGGGACTGTATGCAGGTGAAGTCGGGCTGTAGCTGGGAGAAGTTGGGCTATAACTGGGTGATGTGGGGCTGTAGCTGGGTGATGTAGGACTGTAGC
TGGGTGATGTTGGGCTATAGCTGGGTGATGTGGGAGAGTAGGATGGACTGGTTGGCGAATAAGCCGGACTTGTAGGACTATATCCTGGAGAACTAGGGCT
ATACGTGGGAGAGGTCGGACTGTAACCTGGTGATGTGGGACTGTAGCCCGGAGATGTAGGACTGTACCCAGGTGATGTGGGGCTGTACCCAGGCGATGAT
GGACTATAGCCTGGAGATGATGGACTGTACCCGGGAGATGAGGTGGGAGAAAATGCCATCCCACCAACATAAGGTGAAAACTGGG